RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZNF726A6NNF4 738 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 AKR1C4P17516 323 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 HIST1H1TP22492 207 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 GRK5P34947 590 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 BCL6P41182 706 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 FRKP42685 505 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 EMP3P54852 163 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 EXOSC7Q15024 291 aaKnown RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 FCN2Q15485 313 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 PLK5Q496M5 336 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 KCTD18Q6PI47 426 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 FOXN4Q96NZ1 517 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 ABCG4Q9H172 646 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 C6orf106Q9H6K1 298 aaPredicted RBP9.28□□□□□ -0.92
TRAF1-202ENST00000540010 STARD5Q9NSY2 213 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 SPTBP11277 2137 aa9.28□□□□□ -0.92
TRAF1-202ENST00000540010 A0A1W2PPV9 198 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 SOCS6O14544 535 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 TLX3O43711 291 aaPredicted RBP9.27□□□□□ -0.92
TRAF1-202ENST00000540010 ATP5A1P25705 553 aaKnown RBP9.27□□□□□ -0.92
TRAF1-202ENST00000540010 ARHGDIBP52566 201 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 C21orf58P58505 322 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 FAPQ12884 760 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 PGGHGQ32M88 737 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 XAF1Q6GPH4 301 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 EIF5AL1Q6IS14 154 aaKnown RBP9.27□□□□□ -0.92
TRAF1-202ENST00000540010 CAMKMTQ7Z624 323 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 PTOV1Q86YD1 416 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 FRMD1Q8N878 549 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 SLC7A6Q92536 515 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 TM9SF4Q92544 642 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 TM4SF18Q96CE8 201 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 OR7D2Q96RA2 312 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 ACER3Q9NUN7 267 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 TAAR2Q9P1P5 351 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 EPHA6Q9UF33 1036 aa9.27□□□□□ -0.92
TRAF1-202ENST00000540010 PPM1DO15297 605 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 NDUFB2O95178 105 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 FUT1P19526 365 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 AQP2P41181 271 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 SELENBP1Q13228 472 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 FIGLAQ6QHK4 219 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 FBXL6Q8N531 539 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 OR13H1Q8NG92 308 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 BMFQ96LC9 184 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF582Q96NG8 517 aaPredicted RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 HHIPQ96QV1 700 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 FKBP14Q9NWM8 211 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 DHDHQ9UQ10 334 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 TRANK1O15050 2925 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 A0A0G2JMP0 313 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 A0A1B0GV50 99 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ACOD1A6NK06 481 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 PRAMEF26H0Y7S4 382 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 POLR1CO15160 346 aaPredicted RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 CASC3O15234 703 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ERGP11308 486 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 F3P13726 295 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 MMP11P24347 488 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 BSGP35613 385 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 RPL35P42766 123 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 RABIFP47224 123 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ERVK-25P63136 954 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 BTN1A1Q13410 526 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ZMAT1Q5H9K5 638 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 LYPD4Q6UWN0 246 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 CFAP77Q6ZQR2 320 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 LRRC28Q86X40 367 aaPredicted RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 LACC1Q8IV20 430 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 PNLDC1Q8NA58 520 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 OR4M2Q8NGB6 313 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 CNOT9Q92600 299 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 RBP7Q96R05 134 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 CSF3RQ99062 836 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ORAI3Q9BRQ5 295 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 FBXO8Q9NRD0 319 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ERVK-19Q9WJR5 959 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 LRRK1Q38SD2 2015 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 TMPRSS11DO60235 418 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 FZD7O75084 574 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 CSTBP04080 98 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 THEGLP0DJG4 465 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 PVRP15151 417 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 GZMMP51124 257 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 GPR143P51810 404 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 NRG3P56975 720 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 RRAS2P62070 204 aaPredicted RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 EIF5AP63241 154 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 KCNJ10P78508 379 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 GALK2Q01415 458 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 CDK10Q15131 360 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 BEX5Q5H9J7 111 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 C18orf63Q68DL7 685 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 ALKAL2Q6UX46 152 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 SLC29A4Q7RTT9 530 aa9.27□□□□□ -0.93
TRAF1-202ENST00000540010 NLGN4YQ8NFZ3 816 aaPredicted RBP9.27□□□□□ -0.93
TRAF1-202ENST00000540010 OR5T3Q8NGG3 340 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms