RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 M0R233 179 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 FLRT2O43155 660 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 POU3F2P20265 443 aaPredicted RBP18.73■□□□□ 0.59
TMEM260-203ENST00000539559 LCN1P31025 176 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 GDI2P50395 445 aaKnown RBP18.73■□□□□ 0.59
TMEM260-203ENST00000539559 ZC3H14Q6PJT7 736 aaKnown RBP18.73■□□□□ 0.59
TMEM260-203ENST00000539559 MTSS1LQ765P7 747 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 RANBP3LQ86VV4 465 aaPredicted RBP18.73■□□□□ 0.59
TMEM260-203ENST00000539559 SDR9C7Q8NEX9 313 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 C10orf90Q96M02 699 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 CACYBPQ9HB71 228 aaKnown RBP18.73■□□□□ 0.59
TMEM260-203ENST00000539559 RPS6KB2Q9UBS0 482 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 KLK11Q9UBX7 282 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 CHD9Q3L8U1 2897 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 POM121CA8CG34 1229 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 PTGS2P35354 604 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 NRG3P56975 720 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 GPALPP1Q8IXQ4 340 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 OR56B4Q8NH76 319 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 MARVELD3Q96A59 401 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 MS4A4EQ96PG1 132 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 KRCC1Q9NPI7 259 aaPredicted RBP18.73■□□□□ 0.59
TMEM260-203ENST00000539559 SERGEFQ9UGK8 458 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 SLC27A6Q9Y2P4 619 aa18.73■□□□□ 0.59
TMEM260-203ENST00000539559 A0A1W2PPL8 197 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 RIIAD1A6NNX1 92 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 ARPC1BO15143 372 aaKnown RBP18.72■□□□□ 0.59
TMEM260-203ENST00000539559 LYPD3O95274 346 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 RAD52P43351 418 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 TCTE1Q5JU00 501 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 FAM78AQ5JUQ0 283 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 SLC25A25Q6KCM7 469 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 ASPGQ86U10 573 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 LRRC25Q8N386 305 aaPredicted RBP18.72■□□□□ 0.59
TMEM260-203ENST00000539559 ZNF433Q8N7K0 673 aaPredicted RBP18.72■□□□□ 0.59
TMEM260-203ENST00000539559 OR4K13Q8NH42 304 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 OR52I2Q8NH67 350 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 OR4C6Q8NH72 309 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 PELI1Q96FA3 418 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 PTCHD1Q96NR3 888 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 GPR174Q9BXC1 333 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 WDR26Q9H7D7 661 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 FKRPQ9H9S5 495 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 TRBV23OR9-2A0A075B6M9 112 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 RRASP10301 218 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 LAMP2P13473 410 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 RAB14P61106 215 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 DEFB134Q4QY38 66 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 ZAR1Q86SH2 424 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 ZNRF4Q8WWF5 429 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 SFXN1Q9H9B4 322 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 IL21RQ9HBE5 538 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 HCN3Q9P1Z3 774 aa18.72■□□□□ 0.59
TMEM260-203ENST00000539559 A0A1B0GVI7 797 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 ACOD1A6NK06 481 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 PEX14O75381 377 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 SLC2A5P22732 501 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 GRPRP30550 384 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 BMP8BP34820 402 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 GXYLT1Q4G148 440 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 BMP8AQ7Z5Y6 402 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 OR4E2Q8NGC2 313 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 OR52E2Q8NGJ4 325 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 OR2L8Q8NGY9 312 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 RIT1Q92963 219 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 ASB16Q96NS5 453 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 HRASLSQ9HDD0 168 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 POT1Q9NUX5 634 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 GNG8Q9UK08 70 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 SLC35A3Q9Y2D2 325 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 NPFFR2Q9Y5X5 522 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 ANKRD61A6NGH8 418 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 DUXAA6NLW8 204 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 LDB3O75112 727 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 PROS1P07225 676 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 NT5EP21589 574 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 CCR9P51686 369 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 MAP2K6P52564 334 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 PITPNAQ00169 270 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 PLAURQ03405 335 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 ARHGAP11BQ3KRB8 267 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 SMARCD2Q92925 531 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 CAMK2AQ9UQM7 478 aa18.71■□□□□ 0.59
TMEM260-203ENST00000539559 MID1O15344 667 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 RCBTB2O95199 551 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 CXCL2P19875 107 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 RPS11P62280 158 aaKnown RBP eCLIP18.7■□□□□ 0.58
TMEM260-203ENST00000539559 FGL2Q14314 439 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 IRF4Q15306 451 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 SFRP5Q5T4F7 317 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 GARNL3Q5VVW2 1013 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 VN1R4Q7Z5H5 301 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 FGD2Q7Z6J4 655 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 ETFBKMTQ8IXQ9 262 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 SMIM4Q8WVI0 70 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 LINC00052Q96N35 136 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 COPZ2Q9P299 210 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 MGAT4CQ9UBM8 478 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 YBX2Q9Y2T7 364 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms