RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 USH1CQ9Y6N9 552 aa16.9■□□□□ 0.3
TNFRSF1A-212ENST00000539372 PRR14LQ5THK1 2151 aa16.89■□□□□ 0.3
TNFRSF1A-212ENST00000539372 TMED7-TICAM2A0A0A6YYA0 188 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF724A8MTY0 619 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 LYZL6O75951 148 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 FOSL1P15407 271 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 POLR2JP52435 117 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 MVDP53602 400 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 OR2B6P58173 313 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ITGADQ13349 1161 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 GNA13Q14344 377 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 P2RY6Q15077 328 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TAB1Q15750 504 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 AGBL2Q5U5Z8 902 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ABLIM2Q6H8Q1 611 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 Q6ZT83 130 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 BHLHA15Q7RTS1 189 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 GALNT5Q7Z7M9 940 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF100Q8IYN0 542 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 LRRC75A-AS1Q8N1F1 130 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 MIER2Q8N344 545 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 AURKBQ96GD4 344 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ITCHQ96J02 903 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SMR3AQ99954 134 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 RMND5AQ9H871 391 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TPT1P8Q9HAU6 139 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 RLIMQ9NVW2 624 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 P2RX2Q9UBL9 471 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMED7Q9Y3B3 224 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 FREM1Q5H8C1 2179 aa16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 FLNAP21333 2647 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-212ENST00000539372 RAI1Q7Z5J4 1906 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMEM72A0PK05 275 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CFAP73A6NFT4 308 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PMS2P2O95744 297 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 IGHV3-9P01782 118 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 BCHEP06276 602 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 DBIP07108 87 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TACR3P29371 465 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 POLR2HP52434 150 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 STK11Q15831 433 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 RPS26P11Q5JNZ5 115 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 C6orf10Q5SRN2 563 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 EPGNQ6UW88 154 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ATG4DQ86TL0 474 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PEX5LQ8IYB4 626 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 HSD17B8Q92506 261 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 AKAP1Q92667 903 aaKnown RBP eCLIP16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZHX1-C8orf76Q96EF9 292 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMEM204Q9BSN7 226 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 EMC3Q9P0I2 261 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 OSGIN1Q9UJX0 560 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 HDGFL3Q9Y3E1 203 aa16.88■□□□□ 0.29
TNFRSF1A-212ENST00000539372 HS3ST1O14792 307 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CLOCKO15516 846 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 RAMP1O60894 148 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 GKN3PP0CG01 181 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 IGHV1-2P23083 117 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 HTR3AP46098 478 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 DSTNP60981 165 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 EPS8Q12929 822 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF836Q6ZNA1 936 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 MSANTD1Q6ZTZ1 278 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 YTHDF3Q7Z739 585 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CCDC103Q8IW40 242 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 OR52P1PQ8NH57 321 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SLC38A5Q8WUX1 472 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 C18orf12Q96KH6 178 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 POTEKPQ9BYX7 375 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ROS1P08922 2347 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 DSCAMO60469 2012 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NF1P21359 2839 aa16.87■□□□□ 0.29
TNFRSF1A-212ENST00000539372 IGKV3D-15A0A087WSY6 115 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 FAM234BA2RU67 622 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZNF716A6NP11 495 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TFPTP0C1Z6 253 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZCCHC18P0CG32 403 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 FKBP2P26885 142 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SLC1A3P43003 542 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CLK1P49759 484 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PDK3Q15120 406 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 LIN52Q52LA3 116 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SLC2A7Q6PXP3 512 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 Q71RC1 249 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 UBE2J2Q8N2K1 259 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PIGXQ8TBF5 258 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 PMM1Q92871 262 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 DDIT4LQ96D03 193 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 Q96MF0 132 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 C7orf26Q96N11 449 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 SLCO1B3Q9NPD5 702 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CALML5Q9NZT1 146 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 TMEM181Q9P2C4 612 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 NOSIPQ9Y314 301 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 RNF115Q9Y4L5 304 aa16.86■□□□□ 0.29
TNFRSF1A-212ENST00000539372 ZC3H12DA2A288 527 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CDHR4A6H8M9 788 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 FAAHO00519 579 aa16.85■□□□□ 0.29
TNFRSF1A-212ENST00000539372 CD3EP07766 207 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms