RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 ATP12AP54707 1039 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 FBXW4P57775 412 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 MS4A2Q01362 244 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 LIN52Q52LA3 116 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 EIPR1Q53HC9 387 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 CYBRD1Q53TN4 286 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 LCN8Q6JVE9 175 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 CCDC80Q76M96 950 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 NUP54Q7Z3B4 507 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 HMGN2P46Q86SG4 172 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 C10orf67Q8IYJ2 551 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 OR52P1PQ8NH57 321 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 MBD3L2Q8NHZ7 208 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 FAM110BQ8TC76 370 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 PROX1Q92786 737 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 STMN2Q93045 179 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 POP5Q969H6 163 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 CCL19Q99731 98 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 RBM24Q9BX46 236 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 METTL7AQ9H8H3 244 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 GORASP2Q9H8Y8 452 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 ZFP64Q9NPA5 681 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 UBQLN4Q9NRR5 601 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 FBXO34Q9NWN3 711 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 QPCTLQ9NXS2 382 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 KLRF1Q9NZS2 232 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 C6orf203Q9P0P8 240 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 TESMINQ9Y4I5 508 aa11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-208ENST00000538933 ICOSLGO75144 302 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 UGT2B11O75310 529 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 GUSBP08236 651 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 FBXO45P0C2W1 286 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 PABPC4LP0CB38 370 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 PSMA4P25789 261 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 ERFP50548 548 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 PCBP3P57721 371 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 DMTNQ08495 405 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 FOXF2Q12947 444 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 TNK1Q13470 666 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 ZNF791Q3KP31 576 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 GRAMD1BQ3KR37 738 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 KRTAP24-1Q3LI83 254 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 PDZK1Q5T2W1 519 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 VRK2Q86Y07 508 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 SMYD1Q8NB12 490 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 UGT2B28Q9BY64 529 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 SAP130Q9H0E3 1048 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 BAG5Q9UL15 447 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 AURKCQ9UQB9 309 aa11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 ZNF443Q9Y2A4 671 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-208ENST00000538933 AGAP5A6NIR3 686 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 AQP12BA6NM10 295 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 GTPBP1O00178 669 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 ACOT8O14734 319 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 CASKO14936 926 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 SCO2O43819 266 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 UGT2B17O75795 530 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 CYP7B1O75881 506 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 MFN2O95140 757 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 THBS1P07996 1170 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 EVI2BP34910 448 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 KPNB1Q14974 876 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 MAPK11Q15759 364 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 FXNQ16595 210 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 NTRK2Q16620 822 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 FAM98BQ52LJ0 330 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 SLC22A10Q63ZE4 541 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 VASNQ6EMK4 673 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 EIF3MQ7L2H7 374 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 ZAR1Q86SH2 424 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 AQP12AQ8IXF9 295 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 C9orf106Q8NAJ2 232 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 GATSQ8NAP1 163 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 MAPK1IP1LQ8NDC0 245 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 OR10G3Q8NGC4 313 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 PHOSPHO1Q8TCT1 267 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 PAQR8Q8TEZ7 354 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 OIT3Q8WWZ8 545 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 TAMM41Q96BW9 452 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 NTNG2Q96CW9 530 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 SEPHS2Q99611 448 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 PINK1Q9BXM7 581 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 UBTD1Q9HAC8 227 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 SDHAF3Q9NRP4 125 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 DCAF13Q9NV06 445 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 ZNF701Q9NV72 531 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 ABCG2Q9UNQ0 655 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 SLC9A8Q9Y2E8 581 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 DTNAQ9Y4J8 743 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 DSPPQ9NZW4 1301 aa11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
CLSTN3-208ENST00000538933 DHRS12A0PJE2 317 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms