RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PRAMEF2O60811 474 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 PRKRAO75569 313 aaKnown RBP17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 CLTBP09497 229 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 IL9P15248 144 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 SSR2P43308 183 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 CDK5R1Q15078 307 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 ARSIQ5FYB1 569 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 FAM46CQ5VWP2 391 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 HEPHL1Q6MZM0 1159 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 FAAP20Q6NZ36 180 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 LRRTM4Q86VH4 590 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 DNAAF1Q8NEP3 725 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 OR5M1Q8NGP8 315 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC2A12Q8TD20 617 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 SMAP2Q8WU79 429 aaPredicted RBP17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 SCLYQ96I15 445 aa17.19■□□□□ 0.34
SFSWAP-207ENST00000538548 H2AFB1P0C5Y9 115 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC2A5P22732 501 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 PTH2RP49190 550 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 PUS10Q3MIT2 529 aaKnown RBP17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 SSX6Q7RTT6 188 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 OR14A2Q96R54 314 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 VN1R3Q9BXE9 311 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 HAO2Q9NYQ3 351 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 SPG21Q9NZD8 308 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 NDRG3Q9UGV2 375 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 PLCL2Q9UPR0 1127 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 H7BY64 318 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 H7C2Y5 167 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 SPDEFO95238 335 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 EFEMP2O95967 443 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 RLN2P04090 185 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 NAT2P11245 290 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 FUT1P19526 365 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 MPGP29372 298 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 NOS3P29474 1203 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 EPHB3P54753 998 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 RPS11P62280 158 aaKnown RBP eCLIP17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 ASTLQ6HA08 431 aaPredicted RBP17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 C11orf96Q7Z7L8 435 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 CCDC116Q8IYX3 515 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 OR52B4Q8NGK2 314 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 PRAP1Q96NZ9 151 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 C12orf57Q99622 126 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 SAGE1Q9NXZ1 904 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 SLC35A3Q9Y2D2 325 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 DENND4CQ5VZ89 1909 aa17.18■□□□□ 0.34
SFSWAP-207ENST00000538548 F5H5P2 479 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 OBSL1O75147 1896 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 DCTDP32321 178 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 CD96P40200 585 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 MC2RQ01718 297 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 SCRN3Q0VDG4 424 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF805Q5CZA5 627 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 C9orf64Q5T6V5 341 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 RPL13AP3Q6NVV1 102 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 NRSN1Q8IZ57 195 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 CAMKVQ8NCB2 501 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 CNRIP1Q96F85 164 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 EQTNQ9NQ60 294 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 MRTO4Q9UKD2 239 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 MDC1Q14676 2089 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 C17orf113A0A1B0GUU1 675 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 IFITM5A6NNB3 132 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF879B4DU55 563 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 PPM1DO15297 605 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 EMC8O43402 210 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 RCBTB2O95199 551 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZIC2O95409 532 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF35P13682 527 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 RPA2P15927 270 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 MAKP20794 623 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 DPP4P27487 766 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 P2RX1P51575 399 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 AKR1D1P51857 326 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 OC90Q02509 493 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 MELKQ14680 651 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 AGERQ15109 404 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 TCTN1Q2MV58 587 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 TP53I3Q53FA7 332 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 HES5Q5TA89 166 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 S100A16Q96FQ6 103 aaKnown RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 PEX11GQ96HA9 241 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 PITHD1Q9GZP4 211 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ACTR10Q9NZ32 417 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ZNF223Q9UK11 482 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 MYOFQ9NZM1 2061 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 KIAA1549LQ6ZVL6 1849 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 RIIAD1A6NNX1 92 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 ACOT7O00154 380 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 KPNA3O00505 521 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 OR1F1O43749 312 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 FCMRO60667 390 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 FKTNO75072 461 aa17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 CDC123O75794 336 aaPredicted RBP17.17■□□□□ 0.34
SFSWAP-207ENST00000538548 POP7O75817 140 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms