RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 IFNGP01579 166 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 CFL1P23528 166 aaKnown RBP22.88■■□□□ 1.25
RAB40C-204ENST00000538492 F8A1P23610 371 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 ATP12AP54707 1039 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 SF3B4Q15427 424 aaKnown RBP eCLIP22.88■■□□□ 1.255e-9■■■■■ 30.3
RAB40C-204ENST00000538492 CEACAM19Q7Z692 300 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 GPALPP1Q8IXQ4 340 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 LMF1Q96S06 567 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 N6AMT1Q9Y5N5 214 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 IER3IP1Q9Y5U9 82 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 CAPZBP47756 277 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 TBRG1Q3YBR2 411 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 GATSQ8NAP1 163 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 OR13C5Q8NGS8 318 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 TCTN2Q96GX1 697 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 ST6GAL2Q96JF0 529 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 G6PC3Q9BUM1 346 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 A0A0B4J293 547 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 PROS1P07225 676 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 MYL9P24844 172 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 RCVRNP35243 200 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 SKP1P63208 163 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 METAP1DQ6UB28 335 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-204ENST00000538492 ABHD4Q8TB40 342 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 RNF31Q96EP0 1072 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 EVA1AQ9H8M9 152 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 RNF121Q9H920 327 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 MKKSQ9NPJ1 570 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-204ENST00000538492 SOHLH2Q9NX45 425 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 CHRNA9Q9UGM1 479 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 PCDH15Q96QU1 1955 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 GFERP55789 205 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 IGLV3-21P80748 117 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-204ENST00000538492 TP53I3Q53FA7 332 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-204ENST00000538492 LMX1AQ8TE12 382 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 CLIP3Q96DZ5 547 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 FRMD6Q96NE9 622 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 SLC38A3Q99624 504 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 KLHL1Q9NR64 748 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 EXTL2Q9UBQ6 330 aa22.87■■□□□ 1.25
RAB40C-204ENST00000538492 NDUFB2O95178 105 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 NSA2O95478 260 aaKnown RBP22.86■■□□□ 1.25
RAB40C-204ENST00000538492 GSTT2P0CG29 244 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 GSTT2BP0CG30 244 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 PSKH1P11801 424 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 RPL4P36578 427 aaKnown RBP22.86■■□□□ 1.25
RAB40C-204ENST00000538492 NAA10P41227 235 aaPredicted RBP22.86■■□□□ 1.25
RAB40C-204ENST00000538492 MAP2K3P46734 347 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 RPS5P46782 204 aaKnown RBP22.86■■□□□ 1.25
RAB40C-204ENST00000538492 HBMQ6B0K9 141 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 UBASH3BQ8TF42 649 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 TGM7Q96PF1 710 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 ADAM30Q9UKF2 790 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 MAU2Q9Y6X3 613 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 A0A1B0GVC2 190 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 SERINC4A6NH21 518 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 A6NIN4 97 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 HLA-DQB1P01920 261 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 WNT1P04628 370 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 MAOBP27338 520 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 SGTBQ96EQ0 304 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 PGLYRP3Q96LB9 341 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 CCDC86Q9H6F5 360 aaKnown RBP22.86■■□□□ 1.25
RAB40C-204ENST00000538492 MOV10Q9HCE1 1003 aaKnown RBP22.86■■□□□ 1.25
RAB40C-204ENST00000538492 HAO2Q9NYQ3 351 aa22.86■■□□□ 1.25
RAB40C-204ENST00000538492 MPDZO75970 2070 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 A0A0G2JMP0 313 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 A0A0X1KG70 313 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 A0A1W2PRG6 482 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 IMPA2O14732 288 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 TFP02787 698 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 MLLT3P42568 568 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-204ENST00000538492 IFITM2Q01629 132 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 OR4M2Q8NGB6 313 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 OR51Q1Q8NH59 317 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 GHSRQ92847 366 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 TMEM43Q9BTV4 400 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 TP63Q9H3D4 680 aaPredicted RBP22.85■■□□□ 1.25
RAB40C-204ENST00000538492 NUFIP1Q9UHK0 495 aaKnown RBP22.85■■□□□ 1.25
RAB40C-204ENST00000538492 SERTAD3Q9UJW9 196 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 RASD1Q9Y272 281 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 A0A1W2PPK0 400 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 SLC19A2O60779 497 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 QPRTQ15274 297 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 OR6C4Q8NGE1 309 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 PCDHGB7Q9Y5F8 929 aa22.85■■□□□ 1.25
RAB40C-204ENST00000538492 IGHV5-51A0A0C4DH38 117 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 PLET1Q6UQ28 207 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 ACOT12Q8WYK0 555 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 BEX2Q9BXY8 128 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 ZNF576Q9H609 170 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 ENAMQ9NRM1 1142 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 HMX3A6NHT5 357 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 SERPINI2O75830 405 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 GUSBP08236 651 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 INPP1P49441 399 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 GPR143P51810 404 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 TAS2R43P59537 309 aa22.84■■□□□ 1.25
RAB40C-204ENST00000538492 ACTC1P68032 377 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms