RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 REP15Q6BDI9 236 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 KRT80Q6KB66 452 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 H3F3CQ6NXT2 135 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TNFAIP8L2Q6P589 184 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 DHRS4L2Q6PKH6 230 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 IGFL3Q6UXB1 125 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 RTL4Q6ZR62 310 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF627Q7L945 461 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 C6orf120Q7Z4R8 191 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 WDR53Q7Z5U6 358 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 AMIGO2Q86SJ2 522 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PATL1Q86TB9 770 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF554Q86TJ5 538 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CARM1Q86X55 608 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 RNF130Q86XS8 419 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 FUNDC1Q8IVP5 155 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 GPALPP1Q8IXQ4 340 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CYP4Z2PQ8N1L4 340 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CLEC4FQ8N1N0 589 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 GALNT4Q8N4A0 578 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 DPP10Q8N608 796 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 SLC15A4Q8N697 577 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PACRGLQ8N7B6 248 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 FAM156AQ8NDB6 213 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 SIMC1Q8NDZ2 872 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TSPAN14Q8NG11 270 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 GOT1L1Q8NHS2 421 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 FNDC8Q8TC99 324 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PNPT1Q8TCS8 783 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ADAMTS15Q8TE58 950 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PSMF1Q92530 271 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 GTF2H4Q92759 462 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 EME1Q96AY2 570 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ASB9Q96DX5 294 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 SPACA9Q96E40 222 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 NEURL3Q96EH8 262 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 AURKBQ96GD4 344 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF597Q96LX8 424 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 C5orf34Q96MH7 638 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 RASL10BQ96S79 203 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CDRT15Q96T59 188 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 STACQ99469 402 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PKP2Q99959 881 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 LMF2Q9BU23 707 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 THUMPD3Q9BV44 507 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TINAGL1Q9GZM7 467 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 NXF5Q9H1B4 397 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TMPRSS5Q9H3S3 457 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 LIN28AQ9H9Z2 209 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TPT1P8Q9HAU6 139 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 IL1RL2Q9HB29 575 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CACYBPQ9HB71 228 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PLGRKTQ9HBL7 147 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 SERHLQ9NQF3 203 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF71Q9NQZ8 489 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 C8orf4Q9NR00 106 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 DUSP22Q9NRW4 184 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 EXD2Q9NVH0 621 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 MRPS18AQ9NVS2 196 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 GID8Q9NWU2 228 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 RHBDL2Q9NX52 303 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 THUMPD1Q9NXG2 353 aaKnown RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ANKRD10Q9NXR5 420 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TUBA8Q9NY65 449 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 LRFN1Q9P244 771 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF223Q9UK11 482 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-208ENST00000538266 TP53TG5Q9Y2B4 290 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 DTX4Q9Y2E6 619 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CEPT1Q9Y6K0 416 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 CEP295Q9C0D2 2601 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 SPEGQ15772 3267 aa3.94□□□□□ -1.78
SNHG1-208ENST00000538266 PTPRQQ9UMZ3 2332 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 ACACBO00763 2458 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 CPAMD8Q8IZJ3 1885 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 TRGV11A0A075B6L2 103 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 A0A087WXM4 84 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 ASPDHA6ND91 283 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 C5orf58C9J3I9 102 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 H3BNH8 94 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 CLIC1O00299 241 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 ACOT8O14734 319 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 TO15178 435 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 ASNA1O43681 348 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 PRKNO60260 465 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-208ENST00000538266 SCN2BO60939 215 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 WDPCPO95876 746 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 AK1P00568 194 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 HRGP04196 525 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 P04436 131 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 HNRNPCP07910 306 aaKnown RBP eCLIP3.93□□□□□ -1.78
SNHG1-208ENST00000538266 CT45A8P0DMV1 189 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 CT45A9P0DMV2 189 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 OR12D1P0DN82 309 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 NR2F1P10589 423 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 ACP2P11117 423 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 NAGAP17050 411 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 MATN1P21941 496 aa3.93□□□□□ -1.78
SNHG1-208ENST00000538266 ABCD3P28288 659 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms