RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PCSK9Q8NBP7 692 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 OR52I2Q8NH67 350 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 C15orf40Q8WUR7 153 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 EMID1Q96A84 441 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SMARCD1Q96GM5 515 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 APOLD1Q96LR9 279 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 NECAB3Q96P71 396 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SPG21Q9NZD8 308 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 GAB2Q9UQC2 676 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SLC27A6Q9Y2P4 619 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TSC2P49815 1807 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 NUP214P35658 2090 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF236Q9UL36 1845 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3DA0A087WVF3 549 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ELOA3CA0A087WX78 387 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3IA0A087WXS9 549 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3EA0A087X179 549 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3KA0A087X1G2 549 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 A0A1W2PPC1 479 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 GNG14A0A1W2PPG7 69 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 A0A1W2PPH5 198 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 C1orf226A1L170 272 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3FA6NER0 549 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 OR5H14A6NHG9 310 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 IFITM10A6NMD0 228 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3LB9A6J9 549 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 FKTNO75072 461 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 GUCA1CO95843 209 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 CD8AP01732 235 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 RLN1P04808 185 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 H1F0P07305 194 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 DLSTP36957 453 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 GSK3AP49840 483 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 NDUFA6P56556 154 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 CDK5Q00535 292 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF177Q13360 481 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ELAVL1Q15717 326 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SLC25A35Q3KQZ1 300 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SCGB2B2Q4G0G5 96 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3CQ6IPX1 549 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ACSM5Q6NUN0 579 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 FIGNL1Q6PIW4 674 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 CEACAM19Q7Z692 300 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 PEG10Q86TG7 708 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 FJX1Q86VR8 437 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TBC1D3Q8IZP1 549 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 MUC20Q8N307 709 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 LINC00471Q8N535 108 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 INO80EQ8NBZ0 244 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 NFKBIDQ8NI38 313 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF671Q8TAW3 534 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SLC7A13Q8TCU3 470 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 FGF11Q92914 225 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 CASD1Q96PB1 797 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 ATG101Q9BSB4 218 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 MRIQ9BWK5 157 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 TMEM38AQ9H6F2 299 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 CCDC86Q9H6F5 360 aaKnown RBP7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 SAGE1Q9NXZ1 904 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 MGAMO43451 1857 aa7.92□□□□□ -1.14
SRGAP1-202ENST00000537556 DVL2O14641 736 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 PPP1R2P9O14990 202 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 SCAMP2O15127 329 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 HSPA12AO43301 675 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 NME6O75414 186 aaPredicted RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ARIH2O95376 493 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 VSIG10L2P0DP72 767 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 SNRPBP14678 240 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ELNP15502 786 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 NDUFS1P28331 727 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 MPIP34949 423 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 HSD11B2P80365 405 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 AIMP2Q13155 320 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 TMEM35AQ53FP2 167 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF805Q5CZA5 627 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 C11orf87Q6NUJ2 197 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 TRIM40Q6P9F5 258 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 SBSNQ6UWP8 590 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 DRAM2Q6UX65 266 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 CD300LDQ6UXZ3 194 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ESPNLQ6ZVH7 1005 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 NDUFAF7Q7L592 441 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 SLC35F3Q8IY50 421 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 LRRC18Q8N456 261 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 C19orf47Q8N9M1 422 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 TTC16Q8NEE8 873 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 OR51S1Q8NGJ8 323 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 OR10R2Q8NGX6 335 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ZNF385AQ96PM9 386 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 TRIM36Q9NQ86 728 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 GULP1Q9UBP9 304 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 CACFD1Q9UGQ2 172 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ZDHHC8Q9ULC8 765 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 ANGPT4Q9Y264 503 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 NPIPB8E9PQR5 432 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 TAPBPO15533 448 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 NARSO43776 548 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 SERPINA5P05154 406 aa7.91□□□□□ -1.14
SRGAP1-202ENST00000537556 IL3P08700 152 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms