RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 GPR137Q96N19 417 aa21.88■■□□□ 1.09
HMGA2-208ENST00000537429 ASF1BQ9NVP2 202 aa21.88■■□□□ 1.09
HMGA2-208ENST00000537429 DNAJB9Q9UBS3 223 aa21.88■■□□□ 1.09
HMGA2-208ENST00000537429 PRRC2CQ9Y520 2896 aaKnown RBP21.88■■□□□ 1.09
HMGA2-208ENST00000537429 TMEM72A0PK05 275 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 H0YHG0 523 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 CLOCKO15516 846 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 FCGR1AP12314 374 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 FASP25445 335 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 GCKP35557 465 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 SMIM11AP58511 58 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 RAC1P63000 192 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 FOXD4Q12950 439 aaPredicted RBP21.87■■□□□ 1.09
HMGA2-208ENST00000537429 LRTOMTQ8WZ04 291 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 RRP15Q9Y3B9 282 aaKnown RBP21.87■■□□□ 1.09
HMGA2-208ENST00000537429 LYVE1Q9Y5Y7 322 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 IGSF10Q6WRI0 2623 aa21.87■■□□□ 1.09
HMGA2-208ENST00000537429 H3BML4 177 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 ZNF208O43345 1280 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 DEAF1O75398 565 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-208ENST00000537429 ACTL6AO96019 429 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 BMP7P18075 431 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 CCNA2P20248 432 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 LIMS1P48059 325 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 TDGF1P3P51864 188 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 MLLT10P55197 1068 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 ATP6AP1Q15904 470 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.86■■□□□ 1.09
HMGA2-208ENST00000537429 KRTCAP3Q53RY4 240 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 VASNQ6EMK4 673 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 LILRA2Q8N149 483 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 OR52J3Q8NH60 311 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 SLC7A13Q8TCU3 470 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 TMEM255BQ8WV15 326 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 BBC3Q96PG8 261 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-208ENST00000537429 SLX1AQ9BQ83 275 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 FUZQ9BT04 418 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 VNN3Q9NY84 501 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 SPRR3Q9UBC9 169 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 AP4B1Q9Y6B7 739 aa21.86■■□□□ 1.09
HMGA2-208ENST00000537429 KMT2BQ9UMN6 2715 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-208ENST00000537429 IGKV1D-42A0A075B6H8 117 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 PEPDP12955 493 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 FKBP2P26885 142 aaKnown RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 RBM34P42696 430 aaKnown RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 EGR4Q05215 589 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 SLC25A43Q8WUT9 341 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 ABTB1Q969K4 478 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 HS6ST2Q96MM7 605 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 TMEM43Q9BTV4 400 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 TMEM185BQ9H7F4 350 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 REEP1Q9H902 201 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 NTN4Q9HB63 628 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 SPIN1Q9Y657 262 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 ZNF407Q9C0G0 2248 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 MED12Q93074 2177 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 A0A087WUU8 490 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 TRBV4-1A0A0J9YWV2 114 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 AQP7O14520 342 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 GNGT2O14610 69 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 LDLRP01130 860 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 STARP49675 285 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 LHX2P50458 406 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 FGD3Q5JSP0 725 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 HMBOX1Q6NT76 420 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 TTC33Q6PID6 262 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 ATP6V1C2Q8NEY4 427 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 OR4C15Q8NGM1 316 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 CPT1CQ8TCG5 803 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 STK35Q8TDR2 534 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 TMEM239Q8WW34 195 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 ACOT11Q8WXI4 607 aaPredicted RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 SAMHD1Q9Y3Z3 626 aaKnown RBP21.85■■□□□ 1.09
HMGA2-208ENST00000537429 U3KQV3 271 aa21.85■■□□□ 1.09
HMGA2-208ENST00000537429 ZC3H12DA2A288 527 aaKnown RBP21.84■■□□□ 1.09
HMGA2-208ENST00000537429 A8MVM7 634 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 TNFRSF11BO00300 401 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 NPIPB7O75200 414 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 SHC1P29353 583 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 CRYZQ08257 329 aaKnown RBP21.84■■□□□ 1.09
HMGA2-208ENST00000537429 PPP1R8Q12972 351 aaKnown RBP21.84■■□□□ 1.09
HMGA2-208ENST00000537429 BCL2A1Q16548 175 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 SYT14P1Q58G82 188 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 DCST1Q5T197 706 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 ARHGAP11AQ6P4F7 1023 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 PODNL1Q6PEZ8 512 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 AMIGO2Q86SJ2 522 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 GHDCQ8N2G8 530 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 ALPK1Q96QP1 1244 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 EPYCQ99645 322 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 PKP2Q99959 881 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 OR11A1Q9GZK7 315 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 STOML1Q9UBI4 398 aa21.84■■□□□ 1.09
HMGA2-208ENST00000537429 A0A1B0GTH9 108 aa21.83■■□□□ 1.09
HMGA2-208ENST00000537429 OPN1LWP04000 364 aa21.83■■□□□ 1.09
HMGA2-208ENST00000537429 POU3F2P20265 443 aaPredicted RBP21.83■■□□□ 1.09
HMGA2-208ENST00000537429 PTNP21246 168 aa21.83■■□□□ 1.09
HMGA2-208ENST00000537429 CLK1P49759 484 aaKnown RBP21.83■■□□□ 1.09
HMGA2-208ENST00000537429 IST1P53990 364 aa21.83■■□□□ 1.09
HMGA2-208ENST00000537429 UGT2B15P54855 530 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms