RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ABHD13Q7L211 337 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 SLC16A11Q8NCK7 471 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 OR1E3Q8WZA6 343 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 JAM3Q9BX67 310 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 EVA1AQ9H8M9 152 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 LYRM4Q9HD34 91 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 ENAMQ9NRM1 1142 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 ACTR10Q9NZ32 417 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 H2AFY2Q9P0M6 372 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-203ENST00000535977 EXOGQ9Y2C4 368 aaKnown RBP16.6■□□□□ 0.25
RAB40C-203ENST00000535977 NUBP2Q9Y5Y2 271 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 EEF1E1O43324 174 aaKnown RBP16.6■□□□□ 0.25
RAB40C-203ENST00000535977 GLAP06280 429 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 ZCCHC12Q6PEW1 402 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 CD200R1LQ6Q8B3 271 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 RANBP3LQ86VV4 465 aaPredicted RBP16.6■□□□□ 0.25
RAB40C-203ENST00000535977 TMEM151BQ8IW70 566 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 RNF113BQ8IZP6 322 aaKnown RBP16.6■□□□□ 0.25
RAB40C-203ENST00000535977 OR2A5Q96R48 311 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 DDOQ99489 341 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 SYNPO2LQ9H987 977 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 DAPP1Q9UN19 280 aa16.6■□□□□ 0.25
RAB40C-203ENST00000535977 DOCK8Q8NF50 2099 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 A0A1B0GVC2 190 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 TRDV1A0A1B0GX56 115 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 A6NIN4 97 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 SIGLEC6O43699 453 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 FCMRO60667 390 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 APOL3O95236 402 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 AHCYP23526 432 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 PGGHGQ32M88 737 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 MANEAQ5SRI9 462 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 ZNF620Q6ZNG0 422 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 OR2T33Q8NG76 320 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 OR5T2Q8NGG2 359 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 FGF14Q92915 247 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 RNF32Q9H0A6 362 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 SPACA6W5XKT8 324 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 EYSQ5T1H1 3165 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 TRIOBPQ9H2D6 2365 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 TRAV20A0A0B4J274 112 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 POM121BA6NF01 834 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 H0YC42 278 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 AIPO00170 330 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 FRS3O43559 492 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 SLC19A2O60779 497 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 HOXB2P14652 356 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 NDUFV2P19404 249 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 GALP22466 123 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 HTR1FP30939 366 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 GSG1Q2KHT4 349 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 PABPC1L2AQ5JQF8 200 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 FAM109BQ6ICB4 259 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-203ENST00000535977 FAM111BQ6SJ93 734 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 NKAIN4Q8IVV8 208 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 OR52N1Q8NH53 320 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 CDS1Q92903 461 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 COL26A1Q96A83 441 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 OTULINQ96BN8 352 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 BEX1Q9HBH7 125 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 GPR160Q9UJ42 338 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 C19orf53Q9UNZ5 99 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-203ENST00000535977 SLC22A7Q9Y694 548 aa16.59■□□□□ 0.25
RAB40C-203ENST00000535977 A0A087WV62 115 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 SOX30O94993 753 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 ZIC2O95409 532 aaPredicted RBP16.58■□□□□ 0.25
RAB40C-203ENST00000535977 LIMS3P0CW19 117 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 LIMS4P0CW20 117 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 GNSP15586 552 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 CXCL2P19875 107 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 GIFP27352 417 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 SLC1A3P43003 542 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 MLLT1Q03111 559 aaPredicted RBP16.58■□□□□ 0.25
RAB40C-203ENST00000535977 FAM198BQ6UWH4 519 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 ALKAL2Q6UX46 152 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 ZNF704Q6ZNC4 412 aaPredicted RBP16.58■□□□□ 0.25
RAB40C-203ENST00000535977 ZNF687Q8N1G0 1237 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 KLHL36Q8N4N3 616 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 FLVCR1-AS1Q8TAF5 88 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 RSC1A1Q92681 617 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 GPR52Q9Y2T5 361 aa16.58■□□□□ 0.25
RAB40C-203ENST00000535977 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 SNRNP200O75643 2136 aaKnown RBP16.58■□□□□ 0.24
RAB40C-203ENST00000535977 TGM6O95932 706 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 AK1P00568 194 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 DBIP07108 87 aaKnown RBP16.58■□□□□ 0.24
RAB40C-203ENST00000535977 CPMP14384 443 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 PPP2CBP62714 309 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 PPP2CAP67775 309 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 INSL4Q14641 139 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 TCTE1Q5JU00 501 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 SFRP5Q5T4F7 317 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 FIGLAQ6QHK4 219 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 NRMQ8IXM6 262 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 ZNF485Q8NCK3 441 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 SDF2Q99470 211 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 SLC19A3Q9BZV2 496 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 ENTPD2Q9Y5L3 495 aa16.58■□□□□ 0.24
RAB40C-203ENST00000535977 A0A1W2PQF6 199 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms