RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 IFITM2Q01629 132 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ITGADQ13349 1161 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 TP53BP2Q13625 1128 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 LASP1Q14847 261 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 PTGR1Q14914 329 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 DAZAP2Q15038 168 aaPredicted RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 MLC1Q15049 377 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 PON3Q15166 354 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 POU4F3Q15319 338 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 CHI3L2Q15782 390 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 SGCBQ16585 318 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 SPDYE7PQ495Y7 208 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 GLYR1Q49A26 553 aaPredicted RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 CPTPQ5TA50 214 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 EEF1A1P5Q5VTE0 462 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 OR2A2Q6IF42 318 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ZCCHC12Q6PEW1 402 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 IDO2Q6ZQW0 420 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 PLEKHG7Q6ZR37 379 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 USP43Q70EL4 1123 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ZAR1Q86SH2 424 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 SPARTQ8N0X7 666 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 GALNT4Q8N4A0 578 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 KRTCAP2Q8N6L1 136 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 PIK3C3Q8NEB9 887 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 OR13F1Q8NGS4 319 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 OR4C3Q8NH37 302 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 RP9Q8TA86 221 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 NUDT8Q8WV74 236 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 CDS1Q92903 461 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 NINJ1Q92982 152 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 TUBGCP3Q96CW5 907 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 FAM120BQ96EK7 910 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 SH3YL1Q96HL8 342 aaPredicted RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ZNF845Q96IR2 970 aaPredicted RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 PPP1R36Q96LQ0 422 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 MARCH7Q9H992 704 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 AKIP1Q9NQ31 210 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 SIRT3Q9NTG7 399 aaPredicted RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 FBXO34Q9NWN3 711 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 NTMQ9P121 344 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 ZMAT5Q9UDW3 170 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 EIF3LQ9Y262 564 aaKnown RBP7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 UGT2A1Q9Y4X1 527 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 POLQO75417 2590 aa7.69□□□□□ -1.18
SFSWAP-202ENST00000535202 NPIPA5A0A0B4J1W7 369 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 SH3D21A4FU49 640 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 A8MXE2 369 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 FAM25AB3EWG3 89 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 FAM25CB3EWG5 89 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 FAM25GB3EWG6 89 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 NPIPA7E9PJI5 369 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 SCDO00767 359 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 EIF1AYO14602 144 aaKnown RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 CFLARO15519 480 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 TNFRSF21O75509 655 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 SEC14L2O76054 403 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 HSPA4LO95757 839 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 SERPINE1P05121 402 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 HMGN2P05204 90 aaKnown RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 NGFRP08138 427 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 NPIPA8P0DM63 369 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 ZNF17P17021 662 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 CTRB1P17538 263 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 TBXA2RP21731 343 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 IL12AP29459 219 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 SLC7A1P30825 629 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 SOAT1P35610 550 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 EIF1AXP47813 144 aaKnown RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 CCT3P49368 545 aaKnown RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 RNF144AP50876 292 aaPredicted RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 ZNF41P51814 821 aaPredicted RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 PHC1P78364 1004 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 C6orf136Q5SQH8 315 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 CTRB2Q6GPI1 263 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 CDC73Q6P1J9 531 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 PAMR1Q6UXH9 720 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 BTLAQ7Z6A9 289 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 LILRA2Q8N149 483 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 PARP8Q8N3A8 854 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 OR56A1Q8NGH5 318 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 FNDC9Q8TBE3 224 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 FAM110BQ8TC76 370 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 OR5P2Q8WZ92 322 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 STARD4Q96DR4 205 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 DACH2Q96NX9 599 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 STACQ99469 402 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 PKP2Q99959 881 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 BTBD2Q9BX70 525 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 ACTRT3Q9BYD9 372 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 PRRG4Q9BZD6 226 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 OPN3Q9H1Y3 402 aaPredicted RBP7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 RAD21L1Q9H4I0 556 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 CXorf36Q9H7Y0 433 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 NANOGQ9H9S0 305 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 HHATLQ9HCP6 504 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 UBQLN4Q9NRR5 601 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 EDARQ9UNE0 448 aa7.68□□□□□ -1.18
SFSWAP-202ENST00000535202 TESMINQ9Y4I5 508 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms