RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PGM2L1Q6PCE3 622 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 B3GNT6Q6ZMB0 384 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 ESPNLQ6ZVH7 1005 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 TSEN54Q7Z6J9 526 aaKnown RBP11.79□□□□□ -0.52
TMEM258-202ENST00000535042 RANBP3LQ86VV4 465 aaPredicted RBP11.79□□□□□ -0.52
TMEM258-202ENST00000535042 OR10D3Q8NH80 312 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 DNAJA3Q96EY1 480 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 CCDC120Q96HB5 630 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 HSH2DQ96JZ2 352 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 ARL5BQ96KC2 179 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 CADM1Q9BY67 442 aaKnown RBP11.79□□□□□ -0.52
TMEM258-202ENST00000535042 SRXN1Q9BYN0 137 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 SERINC1Q9NRX5 453 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 DCAF13Q9NV06 445 aaKnown RBP11.79□□□□□ -0.52
TMEM258-202ENST00000535042 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 MAGEL2Q9UJ55 1249 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 SLC9A8Q9Y2E8 581 aa11.79□□□□□ -0.52
TMEM258-202ENST00000535042 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 A0A0B4J2E0 115 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 A0A1B0GX12 115 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 CD8B2A6NJW9 211 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 CPSF4LA6NMK7 179 aaKnown RBP11.78□□□□□ -0.52
TMEM258-202ENST00000535042 GSC2O15499 205 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 FMO6PO60774 539 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 PRKD3O94806 890 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 TGM6O95932 706 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 HOXD4P09016 255 aaPredicted RBP11.78□□□□□ -0.52
TMEM258-202ENST00000535042 TFPIP10646 304 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 KLK2P20151 261 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 EIF1AXP47813 144 aaKnown RBP11.78□□□□□ -0.52
TMEM258-202ENST00000535042 NCALDP61601 193 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 PMPCAQ10713 525 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 TRIM25Q14258 630 aaKnown RBP11.78□□□□□ -0.52
TMEM258-202ENST00000535042 SYT14P1Q58G82 188 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 HBMQ6B0K9 141 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 C9orf106Q8NAJ2 232 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 OSTF1Q92882 214 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 NSMCE2Q96MF7 247 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 OR5B2Q96R09 309 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 UCN2Q96RP3 112 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 AMBRA1Q9C0C7 1298 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 CALHM2Q9HA72 323 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 TMEM27Q9HBJ8 222 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 STOML1Q9UBI4 398 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 RPS6KB2Q9UBS0 482 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 V9GYQ6 96 aa11.78□□□□□ -0.52
TMEM258-202ENST00000535042 RP1L1Q8IWN7 2480 aaPredicted RBP11.78□□□□□ -0.52
TMEM258-202ENST00000535042 IGKV1D-42A0A075B6H8 117 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 MBD3L4A6NDZ8 208 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 MBD3L3A6NE82 208 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 MBD3L5A6NJ08 208 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 GJE1A6NN92 205 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ACOT8O14734 319 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ZNF208O43345 1280 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 GMNNO75496 209 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 DNAJC8O75937 253 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ATP5HO75947 161 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 LDLRP01130 860 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 IMPDH2P12268 514 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 FUT4P22083 530 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 CXCR1P25024 350 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 CDH12P55289 794 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 CARD18P57730 90 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 RPS3AP61247 264 aaKnown RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 PIN1Q13526 163 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 PON3Q15166 354 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 SGCBQ16585 318 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 IFI44LQ53G44 452 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ALG10BQ5I7T1 473 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ZNF613Q6PF04 617 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ULK3Q6PHR2 472 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 CYP2R1Q6VVX0 501 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 WDR88Q6ZMY6 472 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 DEF8Q6ZN54 512 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 TMPPEQ6ZT21 453 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 CHMP1BQ7LBR1 199 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 EID3Q8N140 333 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 NAXEQ8NCW5 288 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 MBD3L2Q8NHZ7 208 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ADAMTS16Q8TE57 1224 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 DNAJA4Q8WW22 397 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 SLC38A4Q969I6 547 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 CCDC124Q96CT7 223 aaKnown RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 C12orf10Q9HB07 376 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 ACTR3BQ9P1U1 418 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 RPS6KA6Q9UK32 745 aa11.77□□□□□ -0.53
TMEM258-202ENST00000535042 SPIN1Q9Y657 262 aaPredicted RBP11.77□□□□□ -0.53
TMEM258-202ENST00000535042 KIAA1549Q9HCM3 1950 aa11.76□□□□□ -0.53
TMEM258-202ENST00000535042 A0A087WUJ7 227 aa11.76□□□□□ -0.53
TMEM258-202ENST00000535042 A0A0G2JNJ9 132 aa11.76□□□□□ -0.53
TMEM258-202ENST00000535042 TCRBV5S2A0A599 114 aa11.76□□□□□ -0.53
TMEM258-202ENST00000535042 WIPF3A6NGB9 483 aa11.76□□□□□ -0.53
TMEM258-202ENST00000535042 ELOA3DA6NLF2 546 aaPredicted RBP11.76□□□□□ -0.53
TMEM258-202ENST00000535042 J3KTA2 159 aa11.76□□□□□ -0.53
TMEM258-202ENST00000535042 ZG16O60844 167 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms