RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	GJE1	A6NN92	205 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	CD5L	O43866	347 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	EFNA2	O43921	213 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	GMFG	O60234	142 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	SEC22B	O75396	215 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	OPN1LW	P04000	364 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	CD3E	P07766	207 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	YES1	P07947	543 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	ACP2	P11117	423 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	HPGD	P15428	266 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	LBP	P18428	481 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	HSPB3	Q12988	150 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	PDE7A	Q13946	482 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	TAB1	Q15750	504 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF672	Q499Z4	452 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	DNAL1	Q4LDG9	190 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	PODNL1	Q6PEZ8	512 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	SEZ6L2	Q6UXD5	910 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	ASRGL1	Q7L266	308 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLC43A2	Q8N370	569 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	NUP43	Q8NFH3	380 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	B4GALNT2	Q8NHY0	566 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	ROBO4	Q8WZ75	1007 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	GTPBP3	Q969Y2	492 aa	Known RBP	10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	PPP1R14A	Q96A00	147 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	MTERF3	Q96E29	417 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	REXO5	Q96IC2	774 aa	Known RBP	10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	MS4A4E	Q96PG1	132 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	BTBD10	Q9BSF8	475 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLCO5A1	Q9H2Y9	848 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	REEP4	Q9H6H4	257 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	EQTN	Q9NQ60	294 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	C1orf109	Q9NX04	203 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	KLHL13	Q9P2N7	655 aa		10.25	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLC28A1	O00337	649 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	SCD	O00767	359 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	IFNA2	P01563	188 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	TP53	P04637	393 aa	Predicted RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ALOX5	P09917	674 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	LINC00032	P0C843	101 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	COX4I1	P13073	169 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ATP4B	P51164	291 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	SUMO3	P55854	103 aa	Predicted RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ITGAD	Q13349	1161 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	CYLC2	Q14093	348 aa	Predicted RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	VEZF1	Q14119	521 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	CD226	Q15762	336 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	DUSP5	Q16690	384 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	PGGHG	Q32M88	737 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	NUFIP2	Q7Z417	695 aa	Known RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	SPATA19	Q7Z5L4	167 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZAR1	Q86SH2	424 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	DTX2	Q86UW9	622 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	TUSC5	Q8IXB3	177 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	RP9	Q8TA86	221 aa	Known RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ABHD3	Q8WU67	409 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	PPCDC	Q96CD2	204 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	STAC	Q99469	402 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	KLHDC3	Q9BQ90	382 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	BTBD2	Q9BX70	525 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	TRIM2	Q9C040	744 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	HOXD1	Q9GZZ0	328 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	AKTIP	Q9H8T0	292 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	BCO1	Q9HAY6	547 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	BARX1	Q9HBU1	254 aa	Predicted RBP	10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	DUSP22	Q9NRW4	184 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ADAM30	Q9UKF2	790 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	ICAM5	Q9UMF0	924 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	LIPT1	Q9Y234	373 aa		10.24	□□□□□ -0.77
CTNND1-238	ENST00000534647	CHD3	Q12873	2000 aa	Known RBP	10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	LOC100653049	A0A140TA62	436 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	DPRX	A6NFQ7	191 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF814	B7Z6K7	855 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	ETV2	O00321	342 aa	Predicted RBP	10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	RGS14	O43566	566 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	KRT34	O76011	436 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	NTN1	O95631	604 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	GHRH	P01286	108 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	CD8A	P01732	235 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	IGHV4-39	P01824	125 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	IL32	P24001	234 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	PRIM2	P49643	509 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	PRKAG1	P54619	331 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	FAP	Q12884	760 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	GSTA3	Q16772	222 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	ATP6AP1L	Q52LC2	224 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	KLHL26	Q53HC5	615 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	ZNF385B	Q569K4	471 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	SLC25A53	Q5H9E4	307 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	HMBOX1	Q6NT76	420 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	RINL	Q6ZS11	566 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647		Q6ZSR9	355 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647		Q6ZT83	130 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	FCRLA	Q7L513	359 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	P2RY8	Q86VZ1	359 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	C10orf67	Q8IYJ2	551 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	POU5F2	Q8N7G0	328 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	COX18	Q8N8Q8	333 aa		10.23	□□□□□ -0.77
CTNND1-238	ENST00000534647	GATS	Q8NAP1	163 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms