RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 FGD3Q5JSP0 725 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 RPUSD3Q6P087 351 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 POMZP3Q6PJE2 187 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 AMIGO2Q86SJ2 522 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 YRDCQ86U90 279 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 NKAIN4Q8IVV8 208 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 GTPBP8Q8N3Z3 284 aaPredicted RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 FAM109AQ8N4B1 249 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 OR5M1Q8NGP8 315 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 OR14L1PQ8NHC6 308 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 RNF217Q8TC41 542 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 SLC38A4Q969I6 547 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 TAAR6Q96RI8 345 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 PRSS27Q9BQR3 290 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 SLC25A18Q9H1K4 315 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 SEMA6AQ9H2E6 1030 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 ANKRD19PQ9H560 264 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 ZDHHC11Q9H8X9 412 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 RNPEPL1Q9HAU8 725 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 C12orf10Q9HB07 376 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 NTN4Q9HB63 628 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 QPCTLQ9NXS2 382 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 STX18Q9P2W9 335 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 OSGIN1Q9UJX0 560 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 RPH3AQ9Y2J0 694 aaPredicted RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 MRPS18CQ9Y3D5 142 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 SAMHD1Q9Y3Z3 626 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 U3KQV3 271 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 PRRC2CQ9Y520 2896 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 TFECO14948 347 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 TRAPPC6AO75865 159 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 PNMTP11086 282 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 PTNP21246 168 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 ADH6P28332 368 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 SMIM11AP58511 58 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 PPP1R8Q12972 351 aaKnown RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 GLYR1Q49A26 553 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 Q8NA96 180 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 SLC7A13Q8TCU3 470 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 TMEM255BQ8WV15 326 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 CENPNQ96H22 339 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 MPP4Q96JB8 637 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 EPYCQ99645 322 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 FUZQ9BT04 418 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 BDH2Q9BUT1 245 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 C6orf203Q9P0P8 240 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 NKX1-2Q9UD57 310 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-217ENST00000532877 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
COL16A1-217ENST00000532877 ITPR2Q14571 2701 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 A0A087WUJ7 227 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 TMED7-TICAM2A0A0A6YYA0 188 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 E2F6O75461 281 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 ATP6V1G2O95670 118 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 SFTPCP11686 197 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 IL11P20809 199 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 CXCR1P25024 350 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 ELK4P28324 431 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 APOBEC1P41238 236 aaKnown RBP12.92□□□□□ -0.34
COL16A1-217ENST00000532877 HMGA2P52926 109 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 GK3PQ14409 553 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 LAPTM4AQ15012 233 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 SEC23BQ15437 767 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 LINC00114Q6XXX2 140 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 TMEM179BQ7Z7N9 219 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 ALPK1Q96QP1 1244 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 PIGQQ9BRB3 760 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 ZNF426Q9BUY5 554 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 SLC6A15Q9H2J7 730 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 CHRNA9Q9UGM1 479 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 TMED7Q9Y3B3 224 aa12.92□□□□□ -0.34
COL16A1-217ENST00000532877 DNAJC13O75165 2243 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 IGKV1D-42A0A075B6H8 117 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 A0A087WUU8 490 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 SH3PXD2BA1X283 911 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 EFNA2O43921 213 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 SUSD5O60279 629 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 CCNA2P20248 432 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 FPR1P21462 350 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 DNAJA1P31689 397 aaKnown RBP12.91□□□□□ -0.34
COL16A1-217ENST00000532877 RBM34P42696 430 aaKnown RBP12.91□□□□□ -0.34
COL16A1-217ENST00000532877 UGT2B15P54855 530 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 GFRA1P56159 465 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 LSM11P83369 360 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL16A1-217ENST00000532877 SELENBP1Q13228 472 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 CMPK2Q5EBM0 449 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 DCST1Q5T197 706 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 C3orf33Q6P1S2 294 aa12.91□□□□□ -0.34
COL16A1-217ENST00000532877 PODNL1Q6PEZ8 512 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms