RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZNF175Q9Y473 711 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 HSPB11Q9Y547 144 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 MYH15Q9Y2K3 1946 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 LILRA5A6NI73 299 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 SUSD5O60279 629 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 CR2P20023 1033 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 WNT4P56705 351 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 CCSMST1Q4G0I0 132 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 TMEM64Q6YI46 380 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 DTX3Q8N9I9 347 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 CYB561A3Q8NBI2 242 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ZMYND19Q96E35 227 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 NPPBP16860 134 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 GFERP55789 205 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 POU3F1Q03052 451 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-221ENST00000532331 TECPR1Q7Z6L1 1165 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 OR5J2Q8NH18 312 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 MYEOVQ96EZ4 313 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 ABCG5Q9H222 651 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 COL4A5P29400 1685 aa10.51□□□□□ -0.73
PTPRK-221ENST00000532331 FAM171A2A8MVW0 826 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 LIM2P55344 173 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SLC26A5P58743 744 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 MYBPHQ13203 477 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NKPD1Q17RQ9 610 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 RNASE10Q5GAN6 216 aaKnown RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 GUSBP11Q6P575 273 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 C5orf46Q6UWT4 87 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NLRP8Q86W28 1048 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 PAPD5Q8NDF8 572 aaKnown RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ACOT11Q8WXI4 607 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 BPIFA2Q96DR5 249 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ANKRD60Q9BZ19 345 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 DEFB127Q9H1M4 99 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NELFAQ9H3P2 528 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 COL11A2P13942 1736 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 RGPD4Q7Z3J3 1758 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 B4GAT1O43505 415 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 STK17BO94768 372 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 WNT11O96014 354 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 AVPR2P30518 371 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ACTBP60709 375 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ACTG1P63261 375 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 OR1J2Q8NGS2 313 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 STOML3Q8TAV4 291 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ASB12Q8WXK4 309 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SARAFQ96BY9 339 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 RAB9BQ9NP90 201 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 CSNK1G3Q9Y6M4 447 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SOX3P41225 446 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 CDK5R2Q13319 367 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 LRRC37A5PQ49AS3 106 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 CPEB2Q7Z5Q1 589 aaKnown RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 CLEC14AQ86T13 490 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF775Q96BV0 537 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SENP5Q96HI0 755 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 BIRC8Q96P09 236 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 OR10A2Q9H208 303 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NT5DC2Q9H857 520 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SLC17A4Q9Y2C5 497 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ZNF337Q9Y3M9 751 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 PTPRZ1P23471 2315 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SERINC4A6NH21 518 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 M0R233 179 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 RP2O75695 350 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NSA2O95478 260 aaKnown RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 IFNGR1P15260 489 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 EPHA8P29322 1005 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 TBRG1Q3YBR2 411 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SLC16A14Q7RTX9 510 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 TRIM46Q7Z4K8 759 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 VRK2Q86Y07 508 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 L3MBTL4Q8NA19 623 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 FBXO27Q8NI29 283 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SUN5Q8TC36 379 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 CPT1CQ8TCG5 803 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 FAM122AQ96E09 287 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 MVB12AQ96EY5 273 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 OBP2BQ9NPH6 170 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 LRFN1Q9P244 771 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 MLXQ9UH92 298 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 H0YIG0 161 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 M0R036 132 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 TSPAN4O14817 238 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NUDT21O43809 227 aaKnown RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 IL2RAP01589 272 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 LPLP06858 475 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SSTR4P31391 388 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 AIMP2Q13155 320 aaKnown RBP10.5□□□□□ -0.73
PTPRK-221ENST00000532331 HES3Q5TGS1 186 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NIPAL3Q6P499 406 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 ADGRG5Q8IZF4 528 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 SDR9C7Q8NEX9 313 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 GDF15Q99988 308 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 BCL7BQ9BQE9 202 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 NUDT22Q9BRQ3 303 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 FBXO4Q9UKT5 387 aa10.5□□□□□ -0.73
PTPRK-221ENST00000532331 GPR171O14626 319 aa10.49□□□□□ -0.73
PTPRK-221ENST00000532331 EIF1BO60739 113 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms