RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 FAM120CQ9NX05 1096 aaKnown RBP6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 TAS2R10Q9NYW0 307 aa6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 B4GALT7Q9UBV7 327 aa6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 EDARQ9UNE0 448 aa6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 FAF1Q9UNN5 650 aaPredicted RBP6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZNF337Q9Y3M9 751 aa6.29□□□□□ -1.4
TRIM53CP-201ENST00000531490 ARID1AO14497 2285 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CENPVL1A0A0U1RR11 272 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 RNF103-CHMP3A0A140T963 221 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 TUBAL3A6NHL2 446 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CCDC154A6NI56 674 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 TTC36A6NLP5 189 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CLCA1A8K7I4 914 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 RNF212BA8MTL3 300 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 AHRRA9YTQ3 701 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 ALG1L2C9J202 215 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 UBDO15205 165 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 EPPINO95925 133 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 OPN1LWP04000 364 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 HRGP04196 525 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR12D1P0DN82 309 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 DDX5P17844 614 aaKnown RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 UQCRC2P22695 453 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SRD5A2P31213 254 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 PRIM2P49643 509 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 LHX2P50458 406 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SEC24CP53992 1094 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CLNS1AP54105 237 aaKnown RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 PSMD4P55036 377 aaKnown RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 AQP5P55064 265 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 DSCR4P56555 118 aaPredicted RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 PSPHP78330 225 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 PPP2R2BQ00005 443 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 C17orf67Q0P5P2 114 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SF3A3Q12874 501 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CD226Q15762 336 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 KLHL26Q53HC5 615 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 NHSL2Q5HYW2 709 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 DCST2Q5T1A1 773 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 RIPPLY2Q5TAB7 128 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 ANXA8L1Q5VT79 327 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SHEQ5VZ18 495 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 TNFAIP8L2Q6P589 184 aaPredicted RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CBLN3Q6UW01 205 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZNF621Q6ZSS3 439 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 YTHDF3Q7Z739 585 aaKnown RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 HMGN2P46Q86SG4 172 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 P3H2Q8IVL5 708 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 FUNDC1Q8IVP5 155 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 KIRREL3Q8IZU9 778 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CCDC197Q8NCU1 140 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR4K17Q8NGC6 315 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR56A1Q8NGH5 318 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 RFWD2Q8NHY2 731 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SFXN5Q8TD22 340 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 XAGE5Q8WWM1 108 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SH3YL1Q96HL8 342 aaPredicted RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CCDC115Q96NT0 180 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 STACQ99469 402 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 BDH2Q9BUT1 245 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 TBL1XR1Q9BZK7 514 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR2B2Q9GZK3 357 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR51I1Q9H343 314 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 SDR39U1Q9NRG7 319 aaPredicted RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 UBQLN4Q9NRR5 601 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 BTNL2Q9UIR0 455 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 MRTO4Q9UKD2 239 aaKnown RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 PCDHGB4Q9UN71 923 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 CAMK2AQ9UQM7 478 aa6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 MRPS18CQ9Y3D5 142 aaKnown RBP6.28□□□□□ -1.4
TRIM53CP-201ENST00000531490 IGLV3-32A0A0A0MS00 114 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 OR2M5A3KFT3 312 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 FAM171A2A8MVW0 826 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 NPIPB9F8W1W9 429 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 EFNA2O43921 213 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 WDR1O75083 606 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 BCAS1O75363 584 aaPredicted RBP6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 TGDSO95455 350 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 IL6P05231 212 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 CELA3BP08861 270 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 IDO1P14902 403 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 CPN1P15169 458 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 HK1P19367 917 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 IL11P20809 199 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 DRD4P21917 467 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 CEACAM8P31997 349 aaPredicted RBP6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 CLK3P49761 638 aaKnown RBP6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 ASCL1P50553 236 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 POLR2JP52435 117 aaKnown RBP6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 ZNF136P52737 540 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 SUCLG1P53597 346 aaKnown RBP6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 MVDP53602 400 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 ATP12AP54707 1039 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 CLDN18P56856 261 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 FUT5Q11128 374 aa6.27□□□□□ -1.41
TRIM53CP-201ENST00000531490 GPR68Q15743 365 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms