RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 DMTNQ08495 405 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 GUSBP1Q15486 140 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 FBXL19-AS1Q494R0 122 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 ERICH5Q6P6B1 374 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 HACD2Q6Y1H2 254 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 PATL1Q86TB9 770 aaKnown RBP17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 CADM2Q8N3J6 435 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 ZNF583Q96ND8 569 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 CCT8L2Q96SF2 557 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 PIGMQ9H3S5 423 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 JKAMPQ9P055 326 aa17.02■□□□□ 0.32
PACSIN3-208ENST00000531226 TMEM72A0PK05 275 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 FAM220BPB1ANY3 271 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 EEF1E1-BLOC1S5C9J1V9 151 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 M0QX08 132 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 EEF1E1O43324 174 aaKnown RBP17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 ZNF208O43345 1280 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 OPN1SWP03999 348 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 TFPIP10646 304 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 NUDT2P50583 147 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 MAP2K6P52564 334 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 C8orf82Q6P1X6 216 aaPredicted RBP17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 VWA1Q6PCB0 445 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 CCDC80Q76M96 950 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 CNEP1R1Q8N9A8 125 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 SMYD1Q8NB12 490 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 RNF128Q8TEB7 428 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 ROBO4Q8WZ75 1007 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 LRRC46Q96FV0 321 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 GMPPAQ96IJ6 420 aaPredicted RBP17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 EVA1AQ9H8M9 152 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 KLHL28Q9NXS3 571 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 SLC13A4Q9UKG4 626 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 PACSIN3Q9UKS6 424 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 USP22Q9UPT9 525 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 AP3M1Q9Y2T2 418 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 HDGFL3Q9Y3E1 203 aa17.01■□□□□ 0.31
PACSIN3-208ENST00000531226 CYSRT1A8MQ03 144 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 HNRNPRO43390 633 aaKnown RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 SHOX2O60902 331 aaPredicted RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 DCTN3O75935 186 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 FAM107AO95990 144 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 COX6B1P14854 86 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 CCNA2P20248 432 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 KIR2DL2P43627 348 aaPredicted RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 DIO1P49895 249 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 CSNK2A1P68400 391 aaPredicted RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 SIRPAP78324 504 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 HOXC5Q00444 222 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 VEZF1Q14119 521 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 TMPPEQ6ZT21 453 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 FCRLAQ7L513 359 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 SLC15A3Q8IY34 581 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 ANKS4BQ8N8V4 417 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 RNASE6Q93091 150 aaKnown RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 C3orf49Q96BT1 292 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 DDIT4LQ96D03 193 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 ARL5BQ96KC2 179 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 LRRC37BQ96QE4 947 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 HOPXQ9BPY8 73 aaPredicted RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 SPOCK3Q9BQ16 436 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 OR11A1Q9GZK7 315 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 GLRX2Q9NS18 164 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 CMTM6Q9NX76 183 aa17■□□□□ 0.31
PACSIN3-208ENST00000531226 TESQ9UGI8 421 aaKnown RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 FOXD3Q9UJU5 478 aaPredicted RBP17■□□□□ 0.31
PACSIN3-208ENST00000531226 MAST4O15021 2626 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 CCT8L1PA6NM43 557 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 SULT2B1O00204 365 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 SYT5O00445 386 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 SS18L1O75177 396 aaPredicted RBP16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 PMS2P2O95744 297 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 PLGP00747 810 aaPredicted RBP16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 CXCR1P25024 350 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 RGS8P57771 180 aaPredicted RBP16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 MYBPHQ13203 477 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 DUSP7Q16829 419 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 GTF2IRD2BQ6EKJ0 949 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 MEX3BQ6ZN04 569 aaKnown RBP16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 FAM214BQ7L5A3 538 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 GTF2IRD2Q86UP8 949 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 LSMEM1Q8N8F7 131 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 OR2T12Q8NG77 320 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 GPR32P1Q8NGA4 272 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 SLC26A7Q8TE54 656 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 ABHD3Q8WU67 409 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 MARVELD3Q96A59 401 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 TAMM41Q96BW9 452 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 STARD4Q96DR4 205 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 CLEC4AQ9UMR7 237 aa16.99■□□□□ 0.31
PACSIN3-208ENST00000531226 SMAD9O15198 467 aaKnown RBP16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 LGI1O95970 557 aa16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 C8BP07358 591 aa16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 CD247P20963 164 aa16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 ENPP1P22413 925 aa16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 HTR2AP28223 471 aa16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 UQCRC1P31930 480 aa16.98■□□□□ 0.31
PACSIN3-208ENST00000531226 KCNJ5P48544 419 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms