RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SLC6A5Q9Y345 797 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CAB39Q9Y376 341 aaPredicted RBP5.12□□□□□ -1.59
PCF11-205ENST00000530906 PCDHGB7Q9Y5F8 929 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PCDHGB6Q9Y5F9 930 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 CORINQ9Y5Q5 1042 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 PMF1-BGLAPU3KQ54 211 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 SCN3AQ9NY46 2000 aa5.12□□□□□ -1.59
PCF11-205ENST00000530906 IGKV3D-11A0A0A0MRZ8 115 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 A0A1B0GWA3 101 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 A0A1W2PQD3 144 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 FRG2CA6NGY1 282 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 SERINC4A6NH21 518 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR6C76A6NM76 312 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PRR23D1E9PI22 279 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 J3QRK9 145 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 M0R129 80 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PEX12O00623 359 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 DSCR3O14972 297 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ARPC3O15145 178 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 BCAT2O15382 392 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 FRS3O43559 492 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PTP4A3O75365 173 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 GPX5O75715 221 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR2B3O76000 313 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 NDUFB2O95178 105 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 THY1P04216 161 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 WNT1P04628 370 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CD1AP06126 327 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 IGFBP1P08833 259 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 CT62P0C5K7 136 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 LIMS3P0CW19 117 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 LIMS4P0CW20 117 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PRR23D2P0DMB1 279 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 SAGP10523 405 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 HK1P19367 917 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 TBXA2RP21731 343 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 F8A1P23610 371 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 HTR2AP28223 471 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CD1CP29017 333 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 RORAP35398 523 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ATP6V1E1P36543 226 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ETV5P41161 510 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ACAA2P42765 397 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 CRYBB2P43320 205 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 GPR4P46093 362 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ARRB1P49407 418 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 ETV1P50549 477 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 BCAP31P51572 246 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PRPS1P60891 318 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 LSM3P62310 102 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 ID2Q02363 134 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 HSF2Q03933 536 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 LGALS3BPQ08380 585 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 IL10RAQ13651 578 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 EXOSC7Q15024 291 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 ELAVL1Q15717 326 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 ALG10BQ5I7T1 473 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PDZK1Q5T2W1 519 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CCNJQ5T5M9 372 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 SLC30A6Q6NXT4 461 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 NIPAL3Q6P499 406 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 METAP1DQ6UB28 335 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 C5orf46Q6UWT4 87 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PAMR1Q6UXH9 720 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 PLEKHG7Q6ZR37 379 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 MEPCEQ7L2J0 689 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 CXXC5Q7LFL8 322 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 DGLUCYQ7Z3D6 616 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CCDC190Q86UF4 302 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 GPR135Q8IZ08 494 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 D2HGDHQ8N465 521 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ACBD7Q8N6N7 88 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ZNF615Q8N8J6 731 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 POMGNT2Q8NAT1 580 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ZNF485Q8NCK3 441 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 FAM71CQ8NEG0 241 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR4Q3Q8NH05 313 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR51Q1Q8NH59 317 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR14A16Q8NHC5 309 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 C16orf52Q8NHV5 167 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ACOT12Q8WYK0 555 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 DAZLQ92904 295 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 SLC25A46Q96AG3 418 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 TMCO6Q96DC7 493 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 MMABQ96EY8 250 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 PEX11GQ96HA9 241 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 AHCYL2Q96HN2 611 aaKnown RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 SLC41A2Q96JW4 573 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CEP19Q96LK0 163 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 GPX7Q96SL4 187 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 SLC30A2Q9BRI3 323 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 TMEM43Q9BTV4 400 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 NDC1Q9BTX1 674 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 CENPOQ9BU64 300 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 TPSD1Q9BZJ3 242 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 C6orf62Q9GZU0 229 aaPredicted RBP5.11□□□□□ -1.59
PCF11-205ENST00000530906 OR10A5Q9H207 317 aa5.11□□□□□ -1.59
PCF11-205ENST00000530906 ANKRA2Q9H9E1 313 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms