RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RNF220	Q5VTB9	566 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	ANKRD34A	Q69YU3	496 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	ABLIM2	Q6H8Q1	611 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	ZNF440	Q8IYI8	595 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	NINJ1	Q92982	152 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	DNAJA3	Q96EY1	480 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	RAD21L1	Q9H4I0	556 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	IKZF5	Q9H5V7	419 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	PLEKHF2	Q9H8W4	249 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	BCO1	Q9HAY6	547 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	BCL2L10	Q9HD36	194 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	KLHL9	Q9P2J3	617 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	PLEKHA6	Q9Y2H5	1048 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	HDGFL3	Q9Y3E1	203 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	SPIN1	Q9Y657	262 aa	Predicted RBP	10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	GMEB1	Q9Y692	573 aa		10.46	□□□□□ -0.73
PSMC3-205	ENST00000528362	MED12L	Q86YW9	2145 aa		10.46	□□□□□ -0.74
PSMC3-205	ENST00000528362	AKAP6	Q13023	2319 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362		A0A0G2JND7	137 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362		A0A1W2PP18	115 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	TMEM72	A0PK05	275 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	TMEM247	A6NEH6	219 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	SULT2B1	O00204	365 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	PMS2P2	O95744	297 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	THBD	P07204	575 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	PRG2	P13727	222 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	CCNA2	P20248	432 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	PSMB1	P20618	241 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	CRYGS	P22914	178 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	EDNRA	P25101	427 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	TACR3	P29371	465 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	ACAA2	P42765	397 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	HTR3A	P46098	478 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	POLR2H	P52434	150 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	CSNK2A1	P68400	391 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	LARS2	Q15031	903 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	GCNT6	Q5T4J0	391 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	PRAMEF8	Q5VWM4	474 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	PRAMEF7	Q5VXH5	474 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	PAMR1	Q6UXH9	720 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	DLEU7	Q6UYE1	221 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	SPNS3	Q6ZMD2	512 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	BEND4	Q6ZU67	534 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	MTDH	Q86UE4	582 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	STK32C	Q86UX6	486 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	GABRG1	Q8N1C3	465 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	BBS10	Q8TAM1	723 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF300	Q96RE9	604 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	SIKE1	Q9BRV8	207 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	TACO1	Q9BSH4	297 aa	Known RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	SPATA9	Q9BWV2	254 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	RABEP2	Q9H5N1	569 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF226	Q9NYT6	803 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	TMED7	Q9Y3B3	224 aa		10.45	□□□□□ -0.74
PSMC3-205	ENST00000528362	HIVEP1	P15822	2718 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	IGKV3D-15	A0A087WSY6	115 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZC3H12D	A2A288	527 aa	Known RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF724	A8MTY0	619 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF814	B7Z6K7	855 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF208	O43345	1280 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	DNPH1	O43598	174 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	GCM2	O75603	506 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	PGM3	O95394	542 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ARAF	P10398	606 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	UQCRB	P14927	111 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	PPIB	P23284	216 aa	Known RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	FKBP2	P26885	142 aa	Known RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	LOX	P28300	417 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	CLK1	P49759	484 aa	Known RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ART1	P52961	327 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	RASGEF1B	Q0VAM2	473 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	SERPINA11	Q86U17	422 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	RETREG3	Q86VR2	466 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	CXorf67	Q86X51	503 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	NFKBID	Q8NI38	313 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF775	Q96BV0	537 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	HS3ST6	Q96QI5	342 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ACTR6	Q9GZN1	396 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ADAM19	Q9H013	955 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	TRIM33	Q9UPN9	1127 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	IFT52	Q9Y366	437 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	F8	P00451	2351 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ABCA4	P78363	2273 aa		10.44	□□□□□ -0.74
PSMC3-205	ENST00000528362	ZNF716	A6NP11	495 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	C5orf58	C9J3I9	102 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	FRS3	O43559	492 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	RAMP1	O60894	148 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	ATE1	O95260	518 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	IMPDH2	P12268	514 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	ETS2	P15036	469 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	PPP3CB	P16298	524 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	GPX2	P18283	190 aa		10.43	□□□□□ -0.74
PSMC3-205	ENST00000528362	OR3A2	P47893	321 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms