RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MAP2K6P52564 334 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 EXOC3L2Q2M3D2 409 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 GCNT6Q5T4J0 391 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 FBXW10Q5XX13 1052 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 DLEU7Q6UYE1 221 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 TSPEARQ8WU66 669 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 WFIKKN1Q96NZ8 548 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 SPATA9Q9BWV2 254 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 OSGIN1Q9UJX0 560 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 NDUFAF1Q9Y375 327 aa23.49■■□□□ 1.35
TSPAN4-217ENST00000527644 ABCA4P78363 2273 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 TMED7-TICAM2A0A0A6YYA0 188 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 EVPLLA8MZ36 301 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 SMAD9O15198 467 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 CYTIPO60759 359 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 PGM3O95394 542 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 GPX2P18283 190 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 TACR3P29371 465 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 ZNF550Q7Z398 422 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 CDC20BQ86Y33 519 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 CLIP4Q8N3C7 705 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 TMEM120AQ9BXJ8 343 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 KLHL4Q9C0H6 718 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 C12orf49Q9H741 205 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 BCO1Q9HAY6 547 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 MED4Q9NPJ6 270 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 TMED7Q9Y3B3 224 aa23.48■■□□□ 1.35
TSPAN4-217ENST00000527644 ANGPT2O15123 496 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ZNF208O43345 1280 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 PMS2P2O95744 297 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 GKN3PP0CG01 181 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ARAFP10398 606 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ETS2P15036 469 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 CCKARP32238 428 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ACAA2P42765 397 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 RASGEF1BQ0VAM2 473 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ZNF311Q5JNZ3 666 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 MTDHQ86UE4 582 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 DPP10Q8N608 796 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ZHX1-C8orf76Q96EF9 292 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ARL5BQ96KC2 179 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 PSD2Q9BQI7 771 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 MED18Q9BUE0 208 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ADAM19Q9H013 955 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 FGFR1OP2Q9NVK5 253 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 KLHL28Q9NXS3 571 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ZNF226Q9NYT6 803 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 ITGB1BP2Q9UKP3 347 aa23.47■■□□□ 1.35
TSPAN4-217ENST00000527644 DNPH1O43598 174 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 FESP07332 822 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 CCNA2P20248 432 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 COPZ1P61923 177 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 CDK6Q00534 326 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 RUNDC3AQ59EK9 446 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 REEP3Q6NUK4 255 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 NUFIP2Q7Z417 695 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 C10orf111Q8N326 155 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 NFKBIDQ8NI38 313 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 NRGNQ92686 78 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 DDIT4LQ96D03 193 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 OR11A1Q9GZK7 315 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 IKZF5Q9H5V7 419 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 TMEM38AQ9H6F2 299 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 MRGBPQ9NV56 204 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 ING1Q9UK53 422 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 TRAPPC4Q9Y296 219 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 CHST2Q9Y4C5 530 aa23.46■■□□□ 1.35
TSPAN4-217ENST00000527644 AKAP6Q13023 2319 aa23.45■■□□□ 1.35
TSPAN4-217ENST00000527644 TMEM72A0PK05 275 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 HRGP04196 525 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 VIMP08670 466 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 DNAJA1P31689 397 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 ARFIP2P53365 341 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 WBP2NLQ6ICG8 309 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 STAC2Q6ZMT1 411 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 DHDDSQ86SQ9 333 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 SLC35B4Q969S0 331 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 CPPED1Q9BRF8 314 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 CCDC134Q9H6E4 229 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 TMEM181Q9P2C4 612 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 EDARQ9UNE0 448 aa23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 HRNRQ86YZ3 2850 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-217ENST00000527644 ZNF724A8MTY0 619 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 PPP3CBP16298 524 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 KLK2P20151 261 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 GUCY1A3Q02108 690 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 PDK3Q15120 406 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 TFAP2EQ6VUC0 442 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 RETREG3Q86VR2 466 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 KRT73Q86Y46 540 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 GPR52Q9Y2T5 361 aa23.44■■□□□ 1.34
TSPAN4-217ENST00000527644 SLC6A2P23975 617 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 CXCR1P25024 350 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 PRKAR1BP31321 381 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 ABLIM2Q6H8Q1 611 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 CADM2Q8N3J6 435 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 NINJ1Q92982 152 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 ANKRD27Q96NW4 1050 aa23.43■■□□□ 1.34
TSPAN4-217ENST00000527644 CGREF1Q99674 301 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms