RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ZNF775Q96BV0 537 aaPredicted RBP15.13■□□□□ 0.01
CCS-203ENST00000526058 PSD2Q9BQI7 771 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 RAD21L1Q9H4I0 556 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 PLEKHF2Q9H8W4 249 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 A4GALTQ9NPC4 353 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 TMEM45AQ9NWC5 275 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 ST6GALNAC2Q9UJ37 374 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 OSGIN1Q9UJX0 560 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 PLEKHA6Q9Y2H5 1048 aa15.13■□□□□ 0.01
CCS-203ENST00000526058 SPIN1Q9Y657 262 aaPredicted RBP15.13■□□□□ 0.01
CCS-203ENST00000526058 PRRC2AP48634 2157 aaKnown RBP15.12■□□□□ 0.01
CCS-203ENST00000526058 TRBV5-3A0A0A0MS03 114 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 TMED7-TICAM2A0A0A6YYA0 188 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 A0A0G2JND7 137 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 A0A1W2PP18 115 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 TMEM72A0PK05 275 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 TMEM247A6NEH6 219 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 FAAHO00519 579 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 CYTIPO60759 359 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 BMP2P12643 396 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 TACR3P29371 465 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 ACAA2P42765 397 aaKnown RBP15.12■□□□□ 0.01
CCS-203ENST00000526058 SLC1A3P43003 542 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 CSNK2A1P68400 391 aaPredicted RBP15.12■□□□□ 0.01
CCS-203ENST00000526058 IRX1P78414 480 aaPredicted RBP15.12■□□□□ 0.01
CCS-203ENST00000526058 RASGEF1BQ0VAM2 473 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 TFAP2EQ6VUC0 442 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 BEND4Q6ZU67 534 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 STK32CQ86UX6 486 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 ZNF300Q96RE9 604 aaPredicted RBP15.12■□□□□ 0.01
CCS-203ENST00000526058 IKZF5Q9H5V7 419 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 ZNF385DQ9H6B1 395 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 BCO1Q9HAY6 547 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 GP6Q9HCN6 339 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 CCM2LQ9NUG4 571 aaPredicted RBP15.12■□□□□ 0.01
CCS-203ENST00000526058 ZNF226Q9NYT6 803 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 KLHL9Q9P2J3 617 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 TMED7Q9Y3B3 224 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 ROS1P08922 2347 aa15.12■□□□□ 0.01
CCS-203ENST00000526058 ZNF469Q96JG9 3925 aaPredicted RBP15.11■□□□□ 0.01
CCS-203ENST00000526058 DEFB108AA8MXU0 73 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 GOSR1O95249 250 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 THBDP07204 575 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 THBS1P07996 1170 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 PRG2P13727 222 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 CRYGSP22914 178 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 EDNRAP25101 427 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 HTR3AP46098 478 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 POLR2HP52434 150 aaKnown RBP15.11■□□□□ 0.01
CCS-203ENST00000526058 ART1P52961 327 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 LARS2Q15031 903 aaKnown RBP15.11■□□□□ 0.01
CCS-203ENST00000526058 RNF220Q5VTB9 566 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 DLEU7Q6UYE1 221 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 ZNF440Q8IYI8 595 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 RSPO3Q9BXY4 272 aaPredicted RBP15.11■□□□□ 0.01
CCS-203ENST00000526058 ADAM19Q9H013 955 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 RABEP2Q9H5N1 569 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 BCL2L10Q9HD36 194 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 ZNF232Q9UNY5 417 aa15.11■□□□□ 0.01
CCS-203ENST00000526058 ZC3H12DA2A288 527 aaKnown RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 ZNF814B7Z6K7 855 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 C5orf58C9J3I9 102 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 GCM2O75603 506 aaPredicted RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 PGM3O95394 542 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 PMS2P2O95744 297 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 UQCRBP14927 111 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 CLK1P49759 484 aaKnown RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 TSC22D1Q15714 1073 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 ZNF311Q5JNZ3 666 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 GCNT6Q5T4J0 391 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 PRAMEF8Q5VWM4 474 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 PRAMEF7Q5VXH5 474 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 SERPINA11Q86U17 422 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 MTDHQ86UE4 582 aaKnown RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 CXorf67Q86X51 503 aaPredicted RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 GABRG1Q8N1C3 465 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 CADM2Q8N3J6 435 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 NFKBIDQ8NI38 313 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 BBS10Q8TAM1 723 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 NINJ1Q92982 152 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 PIK3IP1Q96FE7 263 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 SIKE1Q9BRV8 207 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 SPATA9Q9BWV2 254 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.1■□□□□ 0.01
CCS-203ENST00000526058 TRIM33Q9UPN9 1127 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 IFT52Q9Y366 437 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 HDGFL3Q9Y3E1 203 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 GMEB1Q9Y692 573 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 MED13LQ71F56 2210 aa15.1■□□□□ 0.01
CCS-203ENST00000526058 ZNF208O43345 1280 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 FRS3O43559 492 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 RAMP1O60894 148 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 ARAFP10398 606 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 IMPDH2P12268 514 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 PPIBP23284 216 aaKnown RBP15.09■□□□□ 0.01
CCS-203ENST00000526058 DNASE1P24855 282 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 FKBP2P26885 142 aaKnown RBP15.09■□□□□ 0.01
CCS-203ENST00000526058 OR2B6P58173 313 aa15.09■□□□□ 0.01
CCS-203ENST00000526058 SF3A3Q12874 501 aaKnown RBP eCLIP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms