RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 ROS1P08922 2347 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 CD8BP10966 210 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 DNASE1P24855 282 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 SLC7A1P30825 629 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 PRKAR1BP31321 381 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 CCKARP32238 428 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 CD79BP40259 229 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 SLC1A3P43003 542 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 RAC3P60763 192 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 EPS8Q12929 822 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 RNPS1Q15287 305 aaKnown RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF239Q16600 458 aaKnown RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 TRMT5Q32P41 509 aaKnown RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 RUNDC3AQ59EK9 446 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 ANKRD34AQ69YU3 496 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 C22orf34Q6ZV56 151 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 PLEKHM3Q6ZWE6 761 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 FAM214BQ7L5A3 538 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF550Q7Z398 422 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 NET1Q7Z628 596 aaPredicted RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 SERPINA11Q86U17 422 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 RETREG3Q86VR2 466 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 KRT73Q86Y46 540 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 SLC43A2Q8N370 569 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF563Q8TA94 476 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 RNF128Q8TEB7 428 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 C10orf82Q8WW14 230 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 NINJ1Q92982 152 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 CGREF1Q99674 301 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 FOXC2Q99958 501 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 SH3GL1Q99961 368 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 PLEKHF2Q9H8W4 249 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 KLHL28Q9NXS3 571 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 CHRNA9Q9UGM1 479 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF443Q9Y2A4 671 aaPredicted RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 TESMINQ9Y4I5 508 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
RBBP4-216ENST00000525506 ARID1AO14497 2285 aa9.35□□□□□ -0.91
RBBP4-216ENST00000525506 MTORP42345 2549 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 PRORSD1PA6NEY8 169 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CLDN24A6NM45 220 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CASKO14936 926 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF208O43345 1280 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CCDC22O60826 627 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 BCAS1O75363 584 aaPredicted RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CYP7B1O75881 506 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ATE1O95260 518 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 NUDT7P0C024 238 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 POU2F1P14859 743 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 SLC6A2P23975 617 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 SFTPDP35247 375 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 KCNJ5P48544 419 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CARD18P57730 90 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CSNK2A1P68400 391 aaPredicted RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CDK6Q00534 326 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 MERTKQ12866 999 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 KLF10Q13118 480 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 NFYCQ13952 458 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CYLC2Q14093 348 aaPredicted RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 EXOC3L2Q2M3D2 409 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 SYT14P1Q58G82 188 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 PAMR1Q6UXH9 720 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF836Q6ZNA1 936 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 LSRQ86X29 649 aaPredicted RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 PCYOX1LQ8NBM8 494 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 C11orf65Q8NCR3 313 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 HIPK4Q8NE63 616 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ATP6V1C2Q8NEY4 427 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 OR8J3Q8NGG0 315 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 OR6K3Q8NGY3 331 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ROBO4Q8WZ75 1007 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CNOT9Q92600 299 aaKnown RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ZC3HAV1LQ96H79 300 aaKnown RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 REXO5Q96IC2 774 aaKnown RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ZNF607Q96SK3 696 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 PRRG4Q9BZD6 226 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 NSRP1Q9H0G5 558 aaKnown RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CXXC4Q9H2H0 198 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 IKZF5Q9H5V7 419 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 KAT8Q9H7Z6 458 aaKnown RBP9.34□□□□□ -0.91
RBBP4-216ENST00000525506 COQ10BQ9H8M1 238 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 NDRG3Q9UGV2 375 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 PROCRQ9UNN8 238 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 EMC9Q9Y3B6 208 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 HDGFL3Q9Y3E1 203 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 CAPN7Q9Y6W3 813 aa9.34□□□□□ -0.91
RBBP4-216ENST00000525506 ADAM11O75078 769 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 SERPINB7O75635 380 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 PMS2P2O95744 297 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 RAF1P04049 648 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 UGT2B10P36537 528 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 IDH2P48735 452 aaKnown RBP9.33□□□□□ -0.92
RBBP4-216ENST00000525506 POLR2HP52434 150 aaKnown RBP9.33□□□□□ -0.92
RBBP4-216ENST00000525506 PCBP3P57721 371 aaKnown RBP9.33□□□□□ -0.92
RBBP4-216ENST00000525506 SCARB2Q14108 478 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 KEAP1Q14145 624 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 ADRM1Q16186 407 aa9.33□□□□□ -0.92
RBBP4-216ENST00000525506 TMEM176BQ3YBM2 270 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms