RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 DAP3P51398 398 aaKnown RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 PRPS1P60891 318 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ZNF763Q0D2J5 394 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ARFRP1Q13795 201 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 SELPLGQ14242 412 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 TATDN3Q17R31 274 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 NSUN5P1Q3KNT7 163 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 TP53I3Q53FA7 332 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 GPRC6AQ5T6X5 926 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 RFLNAQ6ZTI6 216 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 C6orf223Q8N319 242 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ATP6V0D2Q8N8Y2 350 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 STXBP6Q8NFX7 210 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ST8SIA1Q92185 356 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 RAPGEF5Q92565 580 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 UCN3Q969E3 161 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 AMDHD1Q96NU7 426 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 NIPSNAP3BQ9BS92 247 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 CHRDL1Q9BU40 450 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ELOVL3Q9HB03 270 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 ZNF225Q9UK10 706 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 AK6Q9Y3D8 172 aaKnown RBP2.73□□□□□ -1.97
CD44-215ENST00000525241 KIF3AQ9Y496 699 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 OR10H1Q9Y4A9 318 aa2.73□□□□□ -1.97
CD44-215ENST00000525241 IGHV3OR16-13A0A075B7E8 117 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 GJE1A6NN92 205 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 A8MUI8 341 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 TAPBPO15533 448 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 CXCL13O43927 109 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 FAM189A1O60320 539 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 OR10H3O60404 316 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 LRATO95237 230 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 KRT13P13646 458 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 UQCRC2P22695 453 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 YWHABP31946 246 aaKnown RBP2.72□□□□□ -1.97
CD44-215ENST00000525241 P2RY1P47900 373 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 KLK7P49862 253 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 POLR2FP61218 127 aaKnown RBP2.72□□□□□ -1.97
CD44-215ENST00000525241 TGFBR3Q03167 851 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 UNC119Q13432 240 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 SLC25A52Q3SY17 297 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 HSP90AA5PQ58FG0 334 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 AGBL2Q5U5Z8 902 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 KHDRBS2Q5VWX1 349 aaKnown RBP2.72□□□□□ -1.97
CD44-215ENST00000525241 CYB5R2Q6BCY4 276 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 C11orf71Q6IPW1 123 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 MOB3BQ86TA1 216 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 SLC38A6Q8IZM9 456 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 PNKDQ8N490 385 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 FAM71E2Q8N5Q1 922 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 BRSK1Q8TDC3 778 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 BLOC1S5Q8TDH9 187 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 FAM151AQ8WW52 585 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 SH3YL1Q96HL8 342 aaPredicted RBP2.72□□□□□ -1.97
CD44-215ENST00000525241 C7orf34Q96L11 122 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 TSG101Q99816 390 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 OMDQ99983 421 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 EDEM2Q9BV94 578 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 VCPKMTQ9H867 229 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 SLC25A22Q9H936 323 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 SLC17A5Q9NRA2 495 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 SLC35D1Q9NTN3 355 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 MTRF1LQ9UGC7 380 aaKnown RBP2.72□□□□□ -1.97
CD44-215ENST00000525241 ASF1AQ9Y294 204 aa2.72□□□□□ -1.97
CD44-215ENST00000525241 A0A1B0GUS0 222 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 DCTN6O00399 190 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 IGHG4P01861 327 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 LGALS2P05162 132 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 PCCBP05166 539 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 KRT8P05787 483 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 MMP11P24347 488 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 ACAA2P42765 397 aaKnown RBP2.71□□□□□ -1.98
CD44-215ENST00000525241 KCNIP4Q6PIL6 250 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 ACP7Q6ZNF0 438 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 PRSS41Q7RTY9 318 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 ZDHHC21Q8IVQ6 265 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 CLEC4FQ8N1N0 589 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 OR2L13Q8N349 312 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 ARIH2OSQ8N7S6 290 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 OR51S1Q8NGJ8 323 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 PELI1Q96FA3 418 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 C16orf45Q96MC5 204 aaPredicted RBP2.71□□□□□ -1.98
CD44-215ENST00000525241 HIST1H4GQ99525 98 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 NRIP2Q9BQI9 281 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 TPPP3Q9BW30 176 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 SELENOIQ9C0D9 397 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 FARSBQ9NSD9 589 aaKnown RBP2.71□□□□□ -1.98
CD44-215ENST00000525241 AATFQ9NY61 560 aaKnown RBP eCLIP2.71□□□□□ -1.98
CD44-215ENST00000525241 IL36GQ9NZH8 169 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 KLK12Q9UKR0 248 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 V9GY05 133 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 GTF3C1Q12789 2109 aa2.71□□□□□ -1.98
CD44-215ENST00000525241 SH3TC1Q8TE82 1336 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 IGHV1OR21-1A0A087WYE8 117 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 TRBV6-6A0A0A6YYG2 114 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 A6NIZ1 184 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 FAM166BA8MTA8 275 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 TRDCB7Z8K6 153 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 TPST2O60704 377 aa2.7□□□□□ -1.98
CD44-215ENST00000525241 KLF8O95600 359 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms