RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TFPIP10646 304 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 PRG2P13727 222 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 AGFG1P52594 562 aaKnown RBP11.22□□□□□ -0.61
CCNC-216ENST00000523961 RAC3P60763 192 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 CSNK2A1P68400 391 aaPredicted RBP11.22□□□□□ -0.61
CCNC-216ENST00000523961 DMTNQ08495 405 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 ZNF239Q16600 458 aaKnown RBP11.22□□□□□ -0.61
CCNC-216ENST00000523961 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 MCEMP1Q8IX19 187 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 CADM2Q8N3J6 435 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 ANKS4BQ8N8V4 417 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 ZNF583Q96ND8 569 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 LRRC37BQ96QE4 947 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 HOPXQ9BPY8 73 aaPredicted RBP11.22□□□□□ -0.61
CCNC-216ENST00000523961 GPATCH1Q9BRR8 931 aaKnown RBP11.22□□□□□ -0.61
CCNC-216ENST00000523961 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 PIGMQ9H3S5 423 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 GLRX2Q9NS18 164 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 HDGFL3Q9Y3E1 203 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 INTS1Q8N201 2190 aaKnown RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 MED12LQ86YW9 2145 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 FAM220BPB1ANY3 271 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 EEF1E1-BLOC1S5C9J1V9 151 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 SULT2B1O00204 365 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 SYT5O00445 386 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 NDUFAB1O14561 156 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 EEF1E1O43324 174 aaKnown RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 ZNF208O43345 1280 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 HNRNPRO43390 633 aaKnown RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 FRS3O43559 492 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 SHOX2O60902 331 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 GCM2O75603 506 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 TNFSF13O75888 250 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 PLGP00747 810 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 COX6B1P14854 86 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 CCNA2P20248 432 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 CXCR1P25024 350 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 NUDT2P50583 147 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 NCALDP61601 193 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 VEZF1Q14119 521 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 GKAP1Q5VSY0 366 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 TMPPEQ6ZT21 453 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 CCDC80Q76M96 950 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 SLC15A3Q8IY34 581 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 SLC43A2Q8N370 569 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 OR2T12Q8NG77 320 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 SLC26A7Q8TE54 656 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 RASSF5Q8WWW0 418 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 DDIT4LQ96D03 193 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 GMPPAQ96IJ6 420 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 SPOCK3Q9BQ16 436 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 RSPO3Q9BXY4 272 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 ENKD1Q9H0I2 346 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 NPDC1Q9NQX5 325 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 JKAMPQ9P055 326 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 RPS6KB2Q9UBS0 482 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 FOXD3Q9UJU5 478 aaPredicted RBP11.21□□□□□ -0.61
CCNC-216ENST00000523961 ADAM21Q9UKJ8 722 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 PACSIN3Q9UKS6 424 aa11.21□□□□□ -0.61
CCNC-216ENST00000523961 UTP20O75691 2785 aaKnown RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 TMEM72A0PK05 275 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 CCT8L1PA6NM43 557 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 MSTNO14793 375 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 PMS2P2O95744 297 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 LGI1O95970 557 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 IFNA14P01570 189 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 OPN1SWP03999 348 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 C8BP07358 591 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ENPP1P22413 925 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 PEX19P40855 299 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 KIR2DL2P43627 348 aaPredicted RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 KCNJ5P48544 419 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 DIO1P49895 249 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 CTBP2P56545 445 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 RGS8P57771 180 aaPredicted RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 SIRPAP78324 504 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 HOXC5Q00444 222 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 MYBPHQ13203 477 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 RNPS1Q15287 305 aaKnown RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 GUSBP1Q15486 140 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 GLIPR1L2Q4G1C9 344 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 FAM91A1Q658Y4 838 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ZNF787Q6DD87 383 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 C8orf82Q6P1X6 216 aaPredicted RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 MEX3BQ6ZN04 569 aaKnown RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 FCRLAQ7L513 359 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 FAM214BQ7L5A3 538 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 COMTD1Q86VU5 262 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 SMYD1Q8NB12 490 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ACBD4Q8NC06 268 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 RNF128Q8TEB7 428 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ROBO4Q8WZ75 1007 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 RNASE6Q93091 150 aaKnown RBP11.2□□□□□ -0.62
CCNC-216ENST00000523961 C3orf49Q96BT1 292 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 STARD4Q96DR4 205 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ZHX1-C8orf76Q96EF9 292 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ARL5BQ96KC2 179 aa11.2□□□□□ -0.62
CCNC-216ENST00000523961 ZNF559Q9BR84 538 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms