RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ANKRD13BQ86YJ7 626 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 PRR18Q8N4B5 295 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 ASCC1Q8N9N2 400 aaKnown RBP15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 IL17RDQ8NFM7 739 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 WFDC5Q8TCV5 224 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 CCDC74AQ96AQ1 378 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 C3orf30Q96M34 536 aa15.14■□□□□ 0.01
PCDHA3-201ENST00000522353 RAD1O60671 282 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CD34P28906 385 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CXCR4P61073 352 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 SEMA3BQ13214 749 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CAMK2DQ13557 499 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 SPRED3Q2MJR0 410 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 C9orf135Q5VTT2 229 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 LHX8Q68G74 356 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 VASNQ6EMK4 673 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 DRAXINQ8NBI3 349 aaPredicted RBP15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 C5P01031 1676 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 B4DXG7 233 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 ENPP1P22413 925 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 ITGB8P26012 769 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 EFNA3P52797 238 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CLDN17P56750 224 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CARD18P57730 90 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CSNK1G2P78368 415 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 RNF175Q8N4F7 328 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 IFI44Q8TCB0 444 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 PLEKHA3Q9HB20 300 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 EMCNQ9ULC0 261 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 A0A087WUU8 490 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 KDM4EB2RXH2 506 aaPredicted RBP15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 B8ZZF3 427 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 NIPAL3Q6P499 406 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 PHC2Q8IXK0 858 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 LHPPQ9H008 270 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 TMEM9BQ9NQ34 198 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 UTS2O95399 124 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 PTH2RP49190 550 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 PDE7AQ13946 482 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 ABHD17CQ6PCB6 329 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 CLEC14AQ86T13 490 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 OR4K15Q8NH41 348 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 GLYATL2Q8WU03 294 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 ITFG2Q969R8 447 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 NUDT22Q9BRQ3 303 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 RHBDD3Q9Y3P4 386 aa15.13■□□□□ 0.01
PCDHA3-201ENST00000522353 SURF4O15260 269 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 PTTG1O95997 202 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 FXYD4P59646 89 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MRPL58Q14197 206 aaKnown RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 UBE2UQ5VVX9 321 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MED25Q71SY5 747 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MEPCEQ7L2J0 689 aaKnown RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 LMNTD1Q8N9Z9 388 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 PIGCQ92535 297 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 ALS2Q96Q42 1657 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 A0A1W2PQL4 384 aaPredicted RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MT-CO2P00403 227 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 SIRPAP78324 504 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 CYCSP99999 105 aaKnown RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 DPTQ07507 201 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 ESCO2Q56NI9 601 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 SFRP4Q6FHJ7 346 aaPredicted RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 ZNF695Q8IW36 515 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 SLC7A13Q8TCU3 470 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 DDX31Q9H8H2 851 aaKnown RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 NAP1L6A6NFF2 107 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 CD40LGP29965 261 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MRPS10P82664 201 aaKnown RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 GPR19Q15760 415 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 FRMPD2BQ6IN97 320 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 SGPP2Q8IWX5 399 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 STEAP2Q8NFT2 490 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MYH10P35580 1976 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 TRAV36DV7A0A075B6V5 113 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 C2orf72A6NCS6 295 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 A6NHS1 94 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MOB3CQ70IA8 216 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 BPHLQ86WA6 291 aaPredicted RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 EGFL6Q8IUX8 553 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 SNAPC3Q92966 411 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 FOXQ1Q9C009 403 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 C1orf198Q9H425 327 aa15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MBNL1Q9NR56 388 aaKnown RBP15.12■□□□□ 0.01
PCDHA3-201ENST00000522353 MSL3P1P0C860 447 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 BMP1P13497 986 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 ARSBP15848 533 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 S100PP25815 95 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 TSPAN31Q12999 210 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 IL10RAQ13651 578 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 GPR176Q14439 515 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 ELAVL1Q15717 326 aaKnown RBP15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 SMAD2Q15796 467 aaKnown RBP15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 PYCR3Q53H96 274 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 OR2B2Q9GZK3 357 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 CNOT2Q9NZN8 540 aaKnown RBP15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 MRPL15Q9P015 296 aaKnown RBP15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 A0A0G2JMP0 313 aa15.11■□□□□ 0.01
PCDHA3-201ENST00000522353 H7C2Y5 167 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms