RNA–Protein interactions for RNA: ENST00000522344.1

CPEB4-210, Transcript of cytoplasmic polyadenylation element binding protein 4, human

TSL 2

Gene CPEB4, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB4-210	ENST00000522344	CDKN3	Q16667	212 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	CCDC40	Q4G0X9	1142 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	TMEM52B	Q4KMG9	183 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	OR6B2	Q6IFH4	312 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	LPCAT2	Q7L5N7	544 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	C17orf82	Q86X59	251 aa	Predicted RBP	2.58	□□□□□ -2
CPEB4-210	ENST00000522344	SUMF2	Q8NBJ7	301 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	ZNF740	Q8NDX6	193 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	IL1F10	Q8WWZ1	152 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	ATP6V0A1	Q93050	837 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	MYDGF	Q969H8	173 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	UPRT	Q96BW1	309 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	SDSL	Q96GA7	329 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	TBX15	Q96SF7	602 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	MBOAT4	Q96T53	435 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	ACAT2	Q9BWD1	397 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	POLR3F	Q9H1D9	316 aa	Predicted RBP	2.58	□□□□□ -2
CPEB4-210	ENST00000522344	GPN2	Q9H9Y4	310 aa	Predicted RBP	2.58	□□□□□ -2
CPEB4-210	ENST00000522344	FETUB	Q9UGM5	382 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	CRLS1	Q9UJA2	301 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	NUDC	Q9Y266	331 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	PRG3	Q9Y2Y8	225 aa	Predicted RBP	2.58	□□□□□ -2
CPEB4-210	ENST00000522344	WSB1	Q9Y6I7	421 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	CDH10	Q9Y6N8	788 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	USP42	Q9H9J4	1324 aa	Known RBP	2.58	□□□□□ -2
CPEB4-210	ENST00000522344	PTPRF	P10586	1907 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	ALPK3	Q96L96	1907 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	ARHGAP21	Q5T5U3	1957 aa		2.58	□□□□□ -2
CPEB4-210	ENST00000522344	MGAM	O43451	1857 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	IGKV2D-24	A0A075B6R9	120 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344		A6NDX4	124 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	WASHC1	A8K0Z3	465 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	DDX39A	O00148	427 aa	Known RBP	2.57	□□□□□ -2
CPEB4-210	ENST00000522344	LGALS8	O00214	317 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	FCN1	O00602	326 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	STX11	O75558	287 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	KLF8	O95600	359 aa	Predicted RBP	2.57	□□□□□ -2
CPEB4-210	ENST00000522344	SLC4A1	P02730	911 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	BCKDHA	P12694	445 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	XRCC1	P18887	633 aa	Predicted RBP	2.57	□□□□□ -2
CPEB4-210	ENST00000522344	AHCY	P23526	432 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	ATP5A1	P25705	553 aa	Known RBP	2.57	□□□□□ -2
CPEB4-210	ENST00000522344	NUDT1	P36639	197 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	CTRL	P40313	264 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	APOC4	P55056	127 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	OSTN	P61366	133 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	PAGE3	Q5JUK9	113 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	ZNF691	Q5VV52	312 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	PVRIG	Q6DKI7	326 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	ASPHD2	Q6ICH7	369 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	C1orf186	Q6ZWK4	172 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	MIER3	Q7Z3K6	550 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	FAM220A	Q7Z4H9	259 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344		Q8N9W7	124 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	STKLD1	Q8NE28	680 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	MARCH1	Q8TCQ1	289 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	FCGR1B	Q92637	280 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	NSMCE2	Q96MF7	247 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	CHIA	Q9BZP6	476 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	SLC25A51	Q9H1U9	297 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	MTRR	Q9UBK8	725 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	XPO7	Q9UIA9	1087 aa	Known RBP	2.57	□□□□□ -2
CPEB4-210	ENST00000522344	RIMS3	Q9UJD0	308 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	AK9	Q5TCS8	1911 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	DOCK3	Q8IZD9	2030 aa		2.57	□□□□□ -2
CPEB4-210	ENST00000522344	CDK5RAP2	Q96SN8	1893 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	SZT2	Q5T011	3432 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	TRIOBP	Q9H2D6	2365 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	CFAP73	A6NFT4	308 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	FAM74A7	A6NL05	159 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	ANKRD63	C9JTQ0	380 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	NPIPB7	O75200	414 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	IGHV4-34	P06331	123 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	THRB	P10828	461 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	ANXA3	P12429	323 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	SFN	P31947	248 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	TNNT2	P45379	298 aa	Predicted RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	RGS1	Q08116	209 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	UNC119	Q13432	240 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	EXOSC2	Q13868	293 aa	Known RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	SYPL1	Q16563	259 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	FAM74A3	Q4VXF1	159 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	DNAJC21	Q5F1R6	531 aa	Known RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	C1QTNF12	Q5T7M4	302 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	ATF7IP2	Q5U623	682 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	CERS5	Q8N5B7	392 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	OR52I1	Q8NGK6	324 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	NEIL3	Q8TAT5	605 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	MS4A14	Q96JA4	679 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	XPO4	Q9C0E2	1151 aa	Known RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	SH2D2A	Q9NP31	389 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	MMP26	Q9NRE1	261 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	CNOT2	Q9NZN8	540 aa	Known RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	NOL7	Q9UMY1	257 aa	Known RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	SCML2	Q9UQR0	700 aa		2.56	□□□□□ -2
CPEB4-210	ENST00000522344	ZNFX1	Q9P2E3	1918 aa	Known RBP	2.56	□□□□□ -2
CPEB4-210	ENST00000522344	RANBP2	P49792	3224 aa	Known RBP	2.55	□□□□□ -2
CPEB4-210	ENST00000522344	LOC100131303	A0A0U1RQF7	123 aa		2.55	□□□□□ -2
CPEB4-210	ENST00000522344		A8MUA0	341 aa		2.55	□□□□□ -2
CPEB4-210	ENST00000522344	TCP11X1	B4DZS4	312 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms