RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF736B4DX44 427 aaPredicted RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MAN2B1O00754 1011 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ABLIM3O94929 683 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 AKAIN1P0CW23 69 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF43P17038 809 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 FAM71E1Q6IPT2 247 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 NECTIN4Q96NY8 510 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 NDUFB11Q9NX14 153 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 CCL26Q9Y258 94 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ANKRD34BA5PLL1 514 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ZAR1LA6NP61 321 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 F3P13726 295 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 APEX1P27695 318 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 RBMS1P29558 406 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 OR52I1Q8NGK6 324 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 ARRDC3Q96B67 414 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 DDIT4LQ96D03 193 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
SYNPO-205ENST00000522122 RARRES3Q9UL19 164 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 MED16Q9Y2X0 877 aa12.88□□□□□ -0.35
SYNPO-205ENST00000522122 PRAMEF26H0Y7S4 382 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 SYT5O00445 386 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 GPX5O75715 221 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 SPDEFO95238 335 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 CHRNB1P11230 501 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 MBTPS1Q14703 1052 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 B3GLCTQ6Y288 498 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 TMEM184AQ6ZMB5 413 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 FAM109AQ8N4B1 249 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 TPSD1Q9BZJ3 242 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 GLIPR2Q9H4G4 154 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 RGCCQ9H4X1 137 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 APMAPQ9HDC9 416 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 NCR1O76036 304 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 MT-ND4P03905 459 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 SLC14A1Q13336 389 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 RPL22L1Q6P5R6 122 aaKnown RBP12.87□□□□□ -0.35
SYNPO-205ENST00000522122 UEVLDQ8IX04 471 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 ADOQ96SZ5 270 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 FZD7O75084 574 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 INHBBP09529 407 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 SLC2A5P22732 501 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 OPRD1P41143 372 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 LAS2Q8IYD9 372 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 OR6T1Q8NGN1 323 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
SYNPO-205ENST00000522122 PTPRFP10586 1907 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 A6NIZ1 184 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 M0R082 166 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 MPIG6BO95866 241 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 RAB40ALP0C0E4 278 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 DRD1P21728 446 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYNPO-205ENST00000522122 RAP1BP61224 184 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 RAP1AP62834 184 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 ARL14Q8N4G2 192 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 RAB40AQ8WXH6 277 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 MAFIPQ8WZ33 124 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 AMDHD1Q96NU7 426 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 LDAHQ9H6V9 325 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 SIDT1Q9NXL6 827 aaKnown RBP12.87□□□□□ -0.35
SYNPO-205ENST00000522122 CPNE7Q9UBL6 633 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
SYNPO-205ENST00000522122 SLC9B1P1A6NJY1 282 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 H3BNC9 293 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 DIRAS3O95661 229 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 EPHA2P29317 976 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 DLX2Q07687 328 aaPredicted RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 NXNL2Q5VZ03 156 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 HBMQ6B0K9 141 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 MBOAT2Q6ZWT7 520 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 SLC35F3Q8IY50 421 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 CDC6Q99741 560 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 EIF5A2Q9GZV4 153 aaKnown RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 MKRN2Q9H000 416 aaKnown RBP12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF442Q9H7R0 627 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 NIPAL2Q9H841 368 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 CLEC2DQ9UHP7 191 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 RCE1Q9Y256 329 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 NOX1Q9Y5S8 564 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
SYNPO-205ENST00000522122 ZNF217O75362 1048 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms