RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ATP6AP1Q15904 470 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 DCST1Q5T197 706 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 OR2T5Q6IEZ7 315 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 AAGABQ6PD74 315 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 GRINAQ7Z429 371 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 NKAIN4Q8IVV8 208 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 GTPBP8Q8N3Z3 284 aaPredicted RBP13.82□□□□□ -0.2
LSM1-203ENST00000520755 OR4C15Q8NGM1 316 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 OR5M9Q8NGP3 310 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 OR2T29Q8NH02 315 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 PRR7Q8TB68 274 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 LRTOMTQ8WZ04 291 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 ABTB1Q969K4 478 aaPredicted RBP13.82□□□□□ -0.2
LSM1-203ENST00000520755 ZBTB8AQ96BR9 441 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 SARAFQ96BY9 339 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 MRGPRX4Q96LA9 322 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 PKP2Q99959 881 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 PIGQQ9BRB3 760 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 ZNF426Q9BUY5 554 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 NMNAT1Q9HAN9 279 aaPredicted RBP13.82□□□□□ -0.2
LSM1-203ENST00000520755 NTN4Q9HB63 628 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 TMEM27Q9HBJ8 222 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 SH3BGRL2Q9UJC5 107 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 OSGIN1Q9UJX0 560 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 ESPL1Q14674 2120 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 IGKV1D-42A0A075B6H8 117 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 TRBV4-1A0A0J9YWV2 114 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 OR2M5A3KFT3 312 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 OR14I1A6ND48 311 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 H0Y3Z8 333 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 H3BML4 177 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 HNRNPRO43390 633 aaKnown RBP13.81□□□□□ -0.2
LSM1-203ENST00000520755 ACTL6AO96019 429 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 CST1P01037 141 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 ZNF17P17021 662 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 STARP49675 285 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 IST1P53990 364 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 GFRA1P56159 465 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 COPZ1P61923 177 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 LSM11P83369 360 aaKnown RBP eCLIP13.81□□□□□ -0.2
LSM1-203ENST00000520755 CRYZQ08257 329 aaKnown RBP13.81□□□□□ -0.2
LSM1-203ENST00000520755 MERTKQ12866 999 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 PPP1R8Q12972 351 aaKnown RBP13.81□□□□□ -0.2
LSM1-203ENST00000520755 RCN1Q15293 331 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 C3AR1Q16581 482 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
LSM1-203ENST00000520755 ALG10BQ5I7T1 473 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 VASNQ6EMK4 673 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 ULK3Q6PHR2 472 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 LINC00114Q6XXX2 140 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 TMEM179BQ7Z7N9 219 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 CD163Q86VB7 1156 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 CYP4Z1Q86W10 505 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 ADGRG3Q86Y34 549 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 FAM57AQ8TBR7 257 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 TMEM234Q8WY98 164 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 SMPDL3BQ92485 455 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 STMN2Q93045 179 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 SLC38A4Q969I6 547 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 ZNF347Q96SE7 839 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 TIMP4Q99727 224 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 PNPLA3Q9NST1 481 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 ZNF835Q9Y2P0 537 aa13.81□□□□□ -0.2
LSM1-203ENST00000520755 TMED7-TICAM2A0A0A6YYA0 188 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 TRGV8A0A0C4DH27 118 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 A0A1W2PRQ8 180 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 TMEM72A0PK05 275 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 H0YHG0 523 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 J3QKU1 62 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 PRRG2O14669 202 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 BCKDKO14874 412 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 CLOCKO15516 846 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 H1F0P07305 194 aaKnown RBP13.8□□□□□ -0.2
LSM1-203ENST00000520755 THRBP10828 461 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 POU3F2P20265 443 aaPredicted RBP13.8□□□□□ -0.2
LSM1-203ENST00000520755 CHMP24386 653 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 SHC1P29353 583 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 EIF1P41567 113 aaKnown RBP13.8□□□□□ -0.2
LSM1-203ENST00000520755 POLR2HP52434 150 aaKnown RBP13.8□□□□□ -0.2
LSM1-203ENST00000520755 UGT2B15P54855 530 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 CASP6P55212 293 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 DGCR6Q14129 220 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 SEC23BQ15437 767 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 NHSL2Q5HYW2 709 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 SWT1Q5T5J6 900 aaKnown RBP13.8□□□□□ -0.2
LSM1-203ENST00000520755 WLSQ5T9L3 541 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 C1QL3Q5VWW1 255 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 POMZP3Q6PJE2 187 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 AMIGO2Q86SJ2 522 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 SLC7A13Q8TCU3 470 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 TMEM255BQ8WV15 326 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 DNAJA4Q8WW22 397 aaPredicted RBP13.8□□□□□ -0.2
LSM1-203ENST00000520755 FNDC11Q9BVV2 318 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 YY1AP1Q9H869 796 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 C12orf10Q9HB07 376 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 ALKBH4Q9NXW9 302 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 RPS6KB2Q9UBS0 482 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 DNAJB9Q9UBS3 223 aa13.8□□□□□ -0.2
LSM1-203ENST00000520755 TINAGQ9UJW2 476 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms