RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 YTHDF1Q9BYJ9 559 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 STRADBQ9C0K7 418 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 NAA50Q9GZZ1 169 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PORCNQ9H237 461 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZDHHC6Q9H6R6 413 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 HEXA-AS1Q9H8Q6 139 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 MOB1AQ9H8S9 216 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 JPT2Q9H910 190 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SP140LQ9H930 580 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 MARCH7Q9H992 704 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CXorf21Q9HAI6 301 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 NMUR1Q9HB89 426 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 IL1RAPQ9NPH3 570 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 NRBP2Q9NSY0 501 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 COMMD8Q9NX08 183 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF319Q9P2F9 582 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMC3IPQ9P2W1 217 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TBK1Q9UHD2 729 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 XPO7Q9UIA9 1087 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSME2Q9UL46 239 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PRPF19Q9UMS4 504 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ERVK-19Q9WJR5 959 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 RBMX2Q9Y388 322 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 UGT2A1Q9Y4X1 527 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CSAG2Q9Y5P2 127 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 MMP24Q9Y5R2 645 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8QA0A0J9YX86 632 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 EXOC1LA0A1B0GW35 172 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ISPDA4D126 451 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8IPA6NC78 632 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8OA6NCC3 632 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZSCAN5BA6NJL1 495 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8JA6NMD2 632 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 MEI4A8MW99 385 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF487B1APH4 448 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CLDN25C9JDP6 229 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8NF8WBI6 632 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GOLGA8RI6L899 631 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 K7ERI5 159 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMD11O00231 422 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 DNALI1O14645 258 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZW10O43264 779 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZBTB14O43829 449 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 NME6O75414 186 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPAG6O75602 509 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TOM1L1O75674 476 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ASS1P00966 412 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 HLA-DRAP01903 254 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRT7P08729 469 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 HTR1AP08908 422 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GNAO1P09471 354 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 RALAP11233 206 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ODC1P11926 461 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SELEP16581 610 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSMC3P17980 439 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 XRCC1P18887 633 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 BGNP21810 368 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CD9P21926 228 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GLRA2P23416 452 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCNCP24863 283 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 IFNA8P32881 189 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GRIA1P42261 906 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CASP3P42574 277 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDKN2BP42772 138 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 MAGEA6P43360 314 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 MAGEB1P43366 347 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 NAMPTP43490 491 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZFP36L2P47974 494 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TAF6P49848 677 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 HLCSP50747 726 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 RIDAP52758 137 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 BACE1P56817 501 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SRP54P61011 504 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 YWHAGP61981 247 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 YWHAEP62258 255 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ADARB1P78563 741 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CNTN2Q02246 1040 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 GNA12Q03113 381 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 KDSRQ06136 332 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 BST2Q10589 180 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SMARCB1Q12824 385 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 PDIA2Q13087 525 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDK10Q15131 360 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SMU1Q2TAY7 513 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TRIM16LQ309B1 348 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC36A3Q495N2 470 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 BRMS1LQ5PSV4 323 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CD164L2Q6UWJ8 174 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM64Q6YI46 380 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TIFABQ6ZNK6 161 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM26Q6ZUK4 368 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 KCTD9Q7L273 389 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ARCQ7LC44 396 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 WDR49Q8IV35 697 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR4N5Q8IXE1 308 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 CARNMT1Q8N4J0 409 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 PACRGLQ8N7B6 248 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 NAT8LQ8N9F0 302 aa2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 ASCC1Q8N9N2 400 aaKnown RBP2.66□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM35BQ8NCS4 154 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms