RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SHCBP1LQ9BZQ2 653 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CD244Q9BZW8 370 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CDC42EP4Q9H3Q1 356 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CCDC134Q9H6E4 229 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 BCO1Q9HAY6 547 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 PPANQ9NQ55 473 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 DDX28Q9NUL7 540 aaKnown RBP4.28□□□□□ -1.72
SDCBP-207ENST00000520168 NSMCE4AQ9NXX6 385 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 NINJ2Q9NZG7 142 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 NPAP1Q9NZP6 1156 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 CD274Q9NZQ7 290 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 MED11Q9P086 117 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 SENP1Q9P0U3 644 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 LGALS13Q9UHV8 139 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 LAMP5Q9UJQ1 280 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 OR10H1Q9Y4A9 318 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 ZNF780BQ9Y6R6 833 aa4.28□□□□□ -1.72
SDCBP-207ENST00000520168 NPIPA5A0A0B4J1W7 369 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 LRP5LA4QPB2 252 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF814B7Z6K7 855 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 B9A039 149 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 E7ESA3 106 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NPIPA7E9PJI5 369 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 K7EPI3 171 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 RGS14O43566 566 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF254O75437 659 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ERAL1O75616 437 aaKnown RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 LY6HO94772 140 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 PNPP00491 289 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 TFP02787 698 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 LTA4HP09960 611 aaKnown RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NPIPA8P0DM63 369 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ANPEPP15144 967 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 EPORP19235 508 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 TYK2P29597 1187 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 GCH1P30793 250 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 PIK3CGP48736 1102 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 VPS41P49754 854 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 IDH3GP51553 393 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF41P51814 821 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SLC12A2P55011 1212 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 PRR5P85299 388 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 GUCY1A3Q02108 690 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ID3Q02535 119 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 RELQ04864 619 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 STX5Q13190 355 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 KCNMB1Q16558 191 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 C18orf21Q32NC0 220 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 TEDDM1Q5T9Z0 273 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 CPTPQ5TA50 214 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 LGSNQ5TDP6 509 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ANKRD22Q5VYY1 191 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 B3GLCTQ6Y288 498 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 C3orf62Q6ZUJ4 267 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 CYS1Q717R9 158 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SPATC1Q76KD6 591 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SLC46A3Q7Z3Q1 461 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NUFIP2Q7Z417 695 aaKnown RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 MISPQ8IVT2 679 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF786Q8N393 782 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SVOPLQ8N434 492 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 C17orf78Q8N4C9 275 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ZNF433Q8N7K0 673 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NAT8LQ8N9F0 302 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SYT14Q8NB59 555 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 OR5M1Q8NGP8 315 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 OR51F2Q8NH61 342 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 DUSP19Q8WTR2 217 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ABHD3Q8WU67 409 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 UBTD2Q8WUN7 234 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 OSTF1Q92882 214 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 ZBTB9Q96C00 473 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 EFHD2Q96C19 240 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 KLHL29Q96CT2 875 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 FBXO17Q96EF6 278 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 CHMP6Q96FZ7 201 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 KLHL15Q96M94 604 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 VSTM2LQ96N03 204 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SNX18Q96RF0 628 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 VRK1Q99986 396 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 FAIM2Q9BWQ8 316 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 TBL1XR1Q9BZK7 514 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 MMP27Q9H306 513 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 C3orf14Q9HBI5 128 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SSU72Q9NP77 194 aaKnown RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SLC52A3Q9NQ40 469 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 INTS9Q9NV88 658 aaKnown RBP4.27□□□□□ -1.73
SDCBP-207ENST00000520168 HIF1ANQ9NWT6 349 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NKIRAS1Q9NYS0 192 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NUDT4Q9NZJ9 180 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 NTMQ9P121 344 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 OPTCQ9UBM4 332 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 CES1P1Q9UKY3 287 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 VDAC3Q9Y277 283 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 AMDHD2Q9Y303 409 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 PCDHA9Q9Y5H5 950 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 CORINQ9Y5Q5 1042 aa4.27□□□□□ -1.73
SDCBP-207ENST00000520168 SLC25A15Q9Y619 301 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms