RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 ZCCHC3Q9NUD5 404 aaKnown RBP6.61□□□□□ -1.35
CLK4-202ENST00000519132 FGFR1OP2Q9NVK5 253 aa6.61□□□□□ -1.35
CLK4-202ENST00000519132 OR12D3Q9UGF7 316 aa6.61□□□□□ -1.35
CLK4-202ENST00000519132 IL17BQ9UHF5 180 aa6.61□□□□□ -1.35
CLK4-202ENST00000519132 ERVW-1Q9UQF0 538 aa6.61□□□□□ -1.35
CLK4-202ENST00000519132 LAMA2P24043 3122 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 NPIPA2E9PIF3 369 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 SERPINA3P01011 423 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 HMBSP08397 361 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ACP2P11117 423 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 OGNP20774 298 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 SHMT2P34897 504 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 COILP38432 576 aaPredicted RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 FOLR3P41439 243 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 CXCR4P61073 352 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 SLC7A9P82251 487 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 TGM3Q08188 693 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ILF2Q12905 390 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 PAFAH1B3Q15102 231 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 CDK10Q15131 360 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 PPP1R3AQ16821 1122 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 PDZK1Q5T2W1 519 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 MFSD12Q6NUT3 480 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 CDK20Q8IZL9 346 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 GPR137CQ8N3F9 429 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 NDNFQ8TB73 568 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ARNTL2Q8WYA1 636 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 MAGOHBQ96A72 148 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 MOAP1Q96BY2 351 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ZNF503Q96F45 646 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 KRT12Q99456 494 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 APOL2Q9BQE5 337 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 GPATCH2LQ9NWQ4 482 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 NPAP1Q9NZP6 1156 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ABCD2Q9UBJ2 740 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 STOML2Q9UJZ1 356 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 NEU3Q9UQ49 428 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 DENND4AQ7Z401 1863 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 KIF26AQ9ULI4 1882 aaPredicted RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 IGLV3-10A0A075B6K4 115 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 RFPL4AA6NLU0 287 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 RFPL4AL1F8VTS6 287 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 EEF2KO00418 725 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 TFECO14948 347 aaPredicted RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 SLC16A5O15375 505 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 INSIG1O15503 277 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 TSPAN2O60636 221 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 GUSBP08236 651 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 EPCAMP16422 314 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 GOT1P17174 413 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 GABRR2P28476 465 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 TGFBR2P37173 567 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 FAM27E3Q08E93 113 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 TSPAN31Q12999 210 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 OXA1LQ15070 435 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ALG10Q5BKT4 473 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ALG10BQ5I7T1 473 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 WASHC2DQ5SRD0 308 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 PRSS57Q6UWY2 283 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 COLCA1Q6ZS62 124 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ZNF683Q8IZ20 524 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 CENPLQ8N0S6 344 aaPredicted RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 METTL4Q8N3J2 472 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 CADM2Q8N3J6 435 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 C17orf47Q8NEP4 570 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 MRPS31Q92665 395 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 SNRNP40Q96DI7 357 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 APOLD1Q96LR9 279 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 ZNF385AQ96PM9 386 aaKnown RBP6.6□□□□□ -1.35
CLK4-202ENST00000519132 TLE6Q9H808 572 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 UBQLN2Q9UHD9 624 aa6.6□□□□□ -1.35
CLK4-202ENST00000519132 DOCK6Q96HP0 2047 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 EPOPA6NHQ4 379 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 MPPED1O15442 326 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 NDUFS4O43181 175 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 SPP1P10451 314 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 THRAP10827 490 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 IGFBP5P24593 272 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 TPI1P60174 286 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 ZNF91Q05481 1191 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 PLA2G7Q13093 441 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 ARMCX4Q5H9R4 360 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 FAM46CQ5VWP2 391 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 SEL1L3Q68CR1 1132 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 NCBP2-AS2Q69YL0 99 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 NANOGP8Q6NSW7 305 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 FAM86B1Q8N7N1 296 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 ACTL9Q8TC94 416 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.35
CLK4-202ENST00000519132 ZNF184Q99676 751 aaPredicted RBP6.59□□□□□ -1.35
CLK4-202ENST00000519132 PRMT1Q99873 361 aaKnown RBP6.59□□□□□ -1.35
CLK4-202ENST00000519132 SPNS1Q9H2V7 528 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 DCLRE1BQ9H816 532 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 GLTPQ9NZD2 209 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 MLXQ9UH92 298 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 GAGE12BA1L429 117 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 GAGE12HA6NDE8 117 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 A8MUA0 341 aa6.59□□□□□ -1.35
CLK4-202ENST00000519132 FAM72CH0Y354 149 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms