RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 RFC4P35249 363 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 LEPP41159 167 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 SPIBQ01892 262 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 KLRC3Q07444 240 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 KCNIP4Q6PIL6 250 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 FAM220AQ7Z4H9 259 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 ATP6V0D2Q8N8Y2 350 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 LINC01555Q8NAE3 123 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 OR52I1Q8NGK6 324 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 OR2T3Q8NH03 318 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 OR56B4Q8NH76 319 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 ELSPBP1Q96BH3 223 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 SEC22AQ96IW7 307 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 TTC25Q96NG3 672 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 PLEKHF1Q96S99 279 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 HIST1H4GQ99525 98 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 RAB34Q9BZG1 259 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 ABCB10Q9NRK6 738 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 IL36GQ9NZH8 169 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 RPS6KB2Q9UBS0 482 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 UGT2A1Q9Y4X1 527 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 CDH10Q9Y6N8 788 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 SH3TC1Q8TE82 1336 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 PLEKHG1Q9ULL1 1385 aa3.07□□□□□ -1.92
SQLE-202ENST00000518604 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 LRP5LA4QPB2 252 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 TRDCB7Z8K6 153 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 TRIM49D1C9J1S8 452 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 ARPC3O15145 178 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 ZNF44P15621 663 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 FUT3P21217 361 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 LAP3P28838 519 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 PTGDSP41222 190 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 MAP3K8P41279 467 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 RIPK4P57078 832 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 CSNK1G2P78368 415 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 MAP2K1Q02750 393 aaPredicted RBP3.06□□□□□ -1.92
SQLE-202ENST00000518604 TLE4Q04727 773 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 PSG7Q13046 419 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 DPYSL2Q16555 572 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 C10orf120Q5SQS8 335 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 C1orf146Q5VVC0 180 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 TPGS2Q68CL5 300 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 CCDC80Q76M96 950 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 NLRP9Q7RTR0 991 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 TTC21BQ7Z4L5 1316 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 PPP1R42Q7Z4L9 355 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 STEAP2Q8NFT2 490 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 ST8SIA1Q92185 356 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 TRIM44Q96DX7 344 aaPredicted RBP3.06□□□□□ -1.92
SQLE-202ENST00000518604 TMEM101Q96IK0 257 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 NARFLQ9H6Q4 476 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 UFSP2Q9NUQ7 469 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 COPS3Q9UNS2 423 aa3.06□□□□□ -1.92
SQLE-202ENST00000518604 A0A0G2JRQ6 117 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 WI2-2373I1.2A0A1W2PRP0 233 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 H0YCG3 227 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 PRRG1O14668 218 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 ABCD4O14678 606 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 CPLX1O14810 134 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 SUPT7LO94864 414 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 PRG2P13727 222 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 MGMTP16455 207 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 CALCRP30988 508 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 IFNAR2P48551 515 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 APOC4P55056 127 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 ASPHQ12797 758 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 C1orf61Q13536 156 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 HERPUD1Q15011 391 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 SLC15A2Q16348 729 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 LRRC23Q53EV4 343 aaPredicted RBP3.05□□□□□ -1.92
SQLE-202ENST00000518604 CASC10Q5T4H9 136 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 GALNT17Q6IS24 598 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 IL34Q6ZMJ4 242 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 RNF175Q8N4F7 328 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 ZNF540Q8NDQ6 660 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
SQLE-202ENST00000518604 PIGCQ92535 297 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 RAPGEF5Q92565 580 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 POLR2J2Q9GZM3 115 aaKnown RBP3.05□□□□□ -1.92
SQLE-202ENST00000518604 POLR2J3Q9H1A7 115 aaKnown RBP3.05□□□□□ -1.92
SQLE-202ENST00000518604 LRRN3Q9H3W5 708 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 NANOGQ9H9S0 305 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 POPDC2Q9HBU9 364 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 PRPF19Q9UMS4 504 aaKnown RBP3.05□□□□□ -1.92
SQLE-202ENST00000518604 ASF1AQ9Y294 204 aa3.05□□□□□ -1.92
SQLE-202ENST00000518604 PTCH1Q13635 1447 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 IGHV3OR16-13A0A075B7E8 117 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 C15orf38-AP3S2A0A0A6YYH1 394 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 A0A1B0GUS0 222 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 PSMB11A5LHX3 300 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 METTL21EPA6NDL7 271 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 VSTM2BA6NLU5 285 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 IDSB3KWA1 339 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 PFKFB2O60825 505 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 ZNF780AO75290 641 aaPredicted RBP3.04□□□□□ -1.92
SQLE-202ENST00000518604 SPAG6O75602 509 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 AP2A1O95782 977 aa3.04□□□□□ -1.92
SQLE-202ENST00000518604 LGI1O95970 557 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms