RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 ADA2Q9NZK5 511 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD274Q9NZQ7 290 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 BFARQ9NZS9 450 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FLRT3Q9NZU0 649 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 JCADQ9P266 1359 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF319Q9P2F9 582 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RCOR3Q9P2K3 495 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GALPQ9UBC7 116 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ABCD2Q9UBJ2 740 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 POLKQ9UBT6 870 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF282Q9UDV7 671 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 C19orf25Q9UFG5 118 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 HMGXB4Q9UGU5 601 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC7A8Q9UHI5 535 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYTH4Q9UIA0 394 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DAPK2Q9UIK4 370 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KIF25Q9UIL4 384 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PHF11Q9UIL8 331 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NAGKQ9UJ70 344 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ENPP5Q9UJA9 477 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PURGQ9UJV8 347 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TINAGQ9UJW2 476 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF221Q9UK13 617 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PILRBQ9UKJ0 227 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRDM4Q9UKN5 801 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IKZF3Q9UKT9 509 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ELF5Q9UKW6 265 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 POMT2Q9UKY4 750 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PADI3Q9ULW8 664 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC7A7Q9UM01 511 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FZR1Q9UM11 496 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 DDX19BQ9UMR2 479 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 STUB1Q9UNE7 303 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF24Q9Y225 148 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC22A14Q9Y267 594 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 POLDIP2Q9Y2S7 368 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KLHDC2Q9Y2U9 406 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 AMDHD2Q9Y303 409 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NSG2Q9Y328 171 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC6A5Q9Y345 797 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF115Q9Y4L5 304 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1A2Q9Y585 309 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TIMM10BQ9Y5J6 103 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 GMPPBQ9Y5P6 360 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FADS3Q9Y5Q0 445 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PEX16Q9Y5Y5 336 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SPIN1Q9Y657 262 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 KPTNQ9Y664 436 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 SAR1BQ9Y6B6 198 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDH10Q9Y6N8 788 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZHX2Q9Y6X8 837 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 COL22A1Q8NFW1 1626 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FHAD1B1AJZ9 1412 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FHOD3Q2V2M9 1422 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ROCK1Q13464 1354 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB3GAP2Q9H2M9 1393 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PDS5AQ29RF7 1337 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAP3K15Q6ZN16 1313 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 UBN2Q6ZU65 1347 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADGRA3Q8IWK6 1321 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAD50Q92878 1312 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDHR2Q9BYE9 1310 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV4OR15-8A0A075B7B6 117 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A087WZ39 114 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A0A6YYD4 124 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRBV9A0A0B4J1U6 114 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV4-28A0A0C4DH34 117 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV2-70DA0A0C4DH43 119 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRBV7-9A0A0J9YWB2 115 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A0J9YWU9 116 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LOC101059948A0A1B0GTJ6 334 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1B0GUA9 196 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 hCG_38984A0A1B0GV85 526 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1B0GW15 77 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1W2PPI3 338 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1W2PPV9 198 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 hDV102S1A0JD36 115 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 NDUFAF8A1L188 74 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRP5LA4QPB2 252 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLEC18AA5D8T8 446 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLGA8IPA6NC78 632 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRR23AA6NEV1 266 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 C5orf60A6NFR6 353 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM74A7A6NL05 159 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SRRM3A6NNA2 597 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 SRRM4A7MD48 611 aaKnown RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 CENPXA8MT69 81 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF212BA8MTL3 300 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 A8MX80 341 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF99A8MXY4 864 aaPredicted RBP0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF814B7Z6K7 855 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRN3E7EW58 273 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 E9PQ18 207 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 LMO7DNF2Z398 122 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 F5H6K3 240 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 F8VP50 259 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 G3V4G9 280 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRAMEF26H0Y7S4 382 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 H0YHG0 523 aa0.5□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLGA6L19H0YKK7 550 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms