RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 NEK3P51956 506 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PPP1CBP62140 327 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 MEF2DQ14814 521 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF77Q15935 545 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLC39A12Q504Y0 691 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SMUG1Q53HV7 270 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 IGSF11Q5DX21 431 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 TCHHL1Q5QJ38 904 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ODR4Q5SWX8 454 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ATF7IP2Q5U623 682 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 C1orf189Q5VU69 101 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 HSDL2Q6YN16 418 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 GUF1Q8N442 669 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 C2orf73Q8N5S3 287 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 CCDC54Q8NEL0 328 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR52J3Q8NH60 311 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLC26A7Q8TE54 656 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 GRK7Q8WTQ7 553 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PHYHIPQ92561 330 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 HVCN1Q96D96 273 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 CPXM1Q96SM3 734 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PAFAH2Q99487 392 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 GOLPH3LQ9H4A5 285 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SH2D4AQ9H788 454 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ISYNA1Q9NPH2 558 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PLCB1Q9NQ66 1216 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PLEK2Q9NYT0 353 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 SAMD4AQ9UPU9 718 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 MRPS16Q9Y3D3 137 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 F11RQ9Y624 299 aaKnown RBP-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 ALG6Q9Y672 507 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 LCTP09848 1927 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 PXDNLA1KZ92 1463 aa-1.82□□□□□ -2.7
RNU6-542P-201ENST00000516405 F8P00451 2351 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SHANK3Q9BYB0 1731 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 EXPH5Q8NEV8 1989 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 MXRA5Q9NR99 2828 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF644Q9H582 1327 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 MAP1BP46821 2468 aaKnown RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 IGHV3OR16-13A0A075B7E8 117 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 LOC102723996A0A087X1L8 192 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 A0A0U1RQV1 116 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 PRSS37A4D1T9 235 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 PDLIM1O00151 329 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 BPY2O14599 106 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 MBTPS2O43462 519 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 FCER2P06734 321 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 VCLP18206 1134 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 IL1RNP18510 177 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 CNR1P21554 472 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SPRR2DP22532 72 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SERPINB3P29508 390 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 LGALS7P47929 136 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 TMED10P49755 219 aaKnown RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 NUMBP49757 651 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 MFAP4P55083 255 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 CDH8P55286 799 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ARL4CP56559 192 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 PSMD6Q15008 389 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 TEX44Q53QW1 395 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR2A2Q6IF42 318 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ABHD13Q7L211 337 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ARCQ7LC44 396 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 GRAMD2AQ8IUY3 354 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SMYD1Q8NB12 490 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR6C4Q8NGE1 309 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR51S1Q8NGJ8 323 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 OR8U1Q8NH10 309 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNRF2Q8NHG8 242 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZNF606Q8WXB4 792 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 LHX4Q969G2 390 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SPATA33Q96N06 139 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 TSSK2Q96PF2 358 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 PRRT1Q99946 306 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ZSCAN16Q9H4T2 348 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLCO1B3Q9NPD5 702 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 PIH1D3Q9NQM4 214 aaKnown RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 CA10Q9NS85 328 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 TECRQ9NZ01 308 aaKnown RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 TREM2Q9NZC2 230 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 LHX3Q9UBR4 397 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLC24A2Q9UI40 661 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 GPR34Q9UPC5 381 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 TSSC4Q9Y5U2 329 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 WDR62O43379 1518 aa-1.83□□□□□ -2.7
RNU6-542P-201ENST00000516405 ADAMTSL1Q8N6G6 1762 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 GRIFINA4D1Z8 144 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 HELTA6NFD8 242 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 F5H6K3 240 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 KIF2AO00139 706 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CLDN4O14493 209 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 RP2O75695 350 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 YIF1AO95070 293 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 NDUFB10O96000 172 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 SLC35G4P0C7Q5 338 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 SETSIPP0DME0 302 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 ATP1B2P14415 290 aaPredicted RBP-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 MYL6BP14649 208 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CYP3A5P20815 502 aa-1.84□□□□□ -2.7
RNU6-542P-201ENST00000516405 CEACAM6P40199 344 aa-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms