RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 B3GLCTQ6Y288 498 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 OR2A12Q8NGT7 310 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 C8orf33Q9H7E9 229 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 MYH7P12883 1935 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 A0A087WZY1 265 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 A0A1W2PP55 124 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 TXNDC12O95881 172 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 NUDT1P36639 197 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 TNK1Q13470 666 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ELAVL3Q14576 367 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SLC35F3Q8IY50 421 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 NEIL2Q969S2 332 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 TBC1D20Q96BZ9 403 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 EHFQ9NZC4 300 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 PURGQ9UJV8 347 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 OR5K4A6NMS3 321 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 F5H5K5 113 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ACOT8O14734 319 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SULT1B1O43704 296 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 FBLP22087 321 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 GABRR1P24046 479 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SLC1A3P43003 542 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 CLDN12P56749 244 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SEC61A1P61619 476 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 OXA1LQ15070 435 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 EBPQ15125 230 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 APCDD1Q8J025 514 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 PRR18Q8N4B5 295 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SENP5Q96HI0 755 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF583Q96ND8 569 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 OR5M11Q96RB7 305 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 CRB3Q9BUF7 120 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF160Q9HCG1 818 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 TREX1Q9NSU2 369 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SUSD2Q9UGT4 822 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 A3GALT2U3KPV4 340 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 NPIPA5A0A0B4J1W7 369 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 PRSS44E7EML9 344 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 NPIPA7E9PJI5 369 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SMIM18P0DKX4 95 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 NPIPA8P0DM63 369 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 CLDN10P78369 228 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 HTRA3P83110 453 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 CAMK2DQ13557 499 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 C3orf38Q5JPI3 329 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ARFGAP1Q8N6T3 406 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 OR2T11Q8NH01 316 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SPTSSAQ969W0 71 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 KIAA1143Q96AT1 154 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 RBMXL1Q96E39 390 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 CPPED1Q9BRF8 314 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 SORBS1Q9BX66 1292 aaKnown RBP12.44□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF281Q9Y2X9 895 aa12.44□□□□□ -0.42
TCOF1-214ENST00000515035 MBLAC1A4D2B0 266 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 JUNBP17275 347 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ERVK-16P61578 105 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ELOAQ14241 798 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 SLC5A12Q1EHB4 618 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 SIAH3Q8IW03 269 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ZNF439Q8NDP4 499 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 LGALS14Q8TCE9 139 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 PGAP3Q96FM1 320 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 HRASLS5Q96KN8 279 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 MYH11P35749 1972 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ACOD1A6NK06 481 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 CNR1P21554 472 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 GBX1Q14549 363 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 PRAMEF8Q5VWM4 474 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 PRAMEF7Q5VXH5 474 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 FIGLAQ6QHK4 219 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 OR10R2Q8NGX6 335 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 KHSRPQ92945 711 aaKnown RBP eCLIP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 DDIT4LQ96D03 193 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 FYTTD1Q96QD9 318 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 RBM24Q9BX46 236 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 NXF5Q9H1B4 397 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 INIPQ9NRY2 104 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ARGFXA6NJG6 315 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 NUDT21O43809 227 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 GASTP01350 101 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 TRIM23P36406 574 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 LIPAP38571 399 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 DUSP3P51452 185 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 GPLD1P80108 840 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 MRPS34P82930 218 aaKnown RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 LINC00299Q6ZSB3 139 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 COX15Q7KZN9 410 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 ABHD12BQ7Z5M8 362 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-214ENST00000515035 TM9SF4Q92544 642 aa12.43□□□□□ -0.42
TCOF1-214ENST00000515035 HCAR1Q9BXC0 346 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms