RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 NDRG4Q9ULP0 352 aaKnown RBP7.55□□□□□ -1.2
CCL28-204ENST00000514421 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
CCL28-204ENST00000514421 LIPGQ9Y5X9 500 aa7.55□□□□□ -1.2
CCL28-204ENST00000514421 LYVE1Q9Y5Y7 322 aa7.55□□□□□ -1.2
CCL28-204ENST00000514421 ENPP4Q9Y6X5 453 aa7.55□□□□□ -1.2
CCL28-204ENST00000514421 A0A087WXM4 84 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 IGLV3-32A0A0A0MS00 114 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 A0A0G2JPF8 293 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 LOC100130705A0A1B0GUX0 176 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 AHRRA9YTQ3 701 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 HNRNPCL2B2RXH8 293 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 HNRNPCL3B7ZW38 293 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 E9PLN8 166 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 NPIPB9F8W1W9 429 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 hCG_2039718K7EN88 272 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 GTPBP1O00178 669 aaKnown RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 SYT5O00445 386 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 FCMRO60667 390 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 E2F6O75461 281 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ACTL6AO96019 429 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 BCHEP06276 602 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 HNRNPCL4P0DMR1 293 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 BMP7P18075 431 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 CDH2P19022 906 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 IGFBP5P24593 272 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 DPP4P27487 766 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 AQP1P29972 269 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 CXCR4P61073 352 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 FUT5Q11128 374 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SF3B4Q15427 424 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCL28-204ENST00000514421 DUSP7Q16829 419 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 MICAQ29983 383 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 GLYR1Q49A26 553 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 KLHL26Q53HC5 615 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 RBM48Q5RL73 367 aaKnown RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 RNF220Q5VTB9 566 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 TMEM211Q6ICI0 200 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ZNF770Q6IQ21 691 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 TTC33Q6PID6 262 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 THAP5Q7Z6K1 395 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 C8orf59Q8N0T1 100 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 PARP8Q8N3A8 854 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 FADS6Q8N9I5 356 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ZNF527Q8NB42 609 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 FAM83FQ8NEG4 500 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 ZNF555Q8NEP9 628 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 OR14L1PQ8NHC6 308 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SSC4DQ8WTU2 575 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 OIT3Q8WWZ8 545 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 RAB8BQ92930 207 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ABTB1Q969K4 478 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 TPD52L3Q96J77 140 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 TRNT1Q96Q11 434 aaKnown RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 VKORC1Q9BQB6 163 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SPATA5L1Q9BVQ7 753 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SAP130Q9H0E3 1048 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 TP63Q9H3D4 680 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 MTHFD2LQ9H903 347 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 POLE3Q9NRF9 147 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ACER3Q9NUN7 267 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ALKBH4Q9NXW9 302 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 TAS2R10Q9NYW0 307 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 CALML5Q9NZT1 146 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SH3BGRL2Q9UJC5 107 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 TINAGQ9UJW2 476 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 DKKL1Q9UK85 242 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 FBXL2Q9UKC9 423 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 MKLN1Q9UL63 735 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 MEMO1Q9Y316 297 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SLC6A5Q9Y345 797 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 SAMHD1Q9Y3Z3 626 aaKnown RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 HRH3Q9Y5N1 445 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 ORC6Q9Y5N6 252 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 UBR5O95071 2799 aaPredicted RBP7.54□□□□□ -1.2
CCL28-204ENST00000514421 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 RELNP78509 3460 aa7.54□□□□□ -1.2
CCL28-204ENST00000514421 MED12Q93074 2177 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 A0A087WZY1 265 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 C5orf58C9J3I9 102 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 LINC01387J3KSC0 135 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 FFAR1O14842 300 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 EIF4E2O60573 245 aaKnown RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 WDR1O75083 606 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 SERPINB7O75635 380 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 OPN1SWP03999 348 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 IFNW1P05000 195 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 FESP07332 822 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CHRM4P08173 479 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CCDC159P0C7I6 412 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 NR2F1P10589 423 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ANXA8P13928 327 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 GABRA1P14867 456 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
CCL28-204ENST00000514421 HK1P19367 917 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 PRKACGP22612 351 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 CHMP24386 653 aa7.53□□□□□ -1.2
CCL28-204ENST00000514421 ACVR2AP27037 513 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms