RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 DMKNQ6E0U4 476 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 C22orf42Q6IC83 251 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 OR7E24Q6IFN5 339 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 RPUSD3Q6P087 351 aaKnown RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 TRAPPC5Q8IUR0 188 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 ATG16L2Q8NAA4 619 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 WDR36Q8NI36 951 aaKnown RBP6.83□□□□□ -1.32
CLIP1-205ENST00000514271 RHBDD1Q8TEB9 315 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 OSGEPL1Q9H4B0 414 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 REEP4Q9H6H4 257 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 CXorf36Q9H7Y0 433 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 CTPS2Q9NRF8 586 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 HAO2Q9NYQ3 351 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 OR1A2Q9Y585 309 aa6.83□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM202A6NGA9 273 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 E7EQ34 232 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 POP7O75817 140 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 HPXP02790 462 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 IMPA1P29218 277 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CTBP2P56545 445 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CDC42P60953 191 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 UBE2IP63279 158 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 INSL4Q14641 139 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 LIPKQ5VXJ0 399 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 FAM83HQ6ZRV2 1179 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 RASGEF1AQ8N9B8 481 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 OR4K1Q8NGD4 311 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SLC22A18Q96BI1 424 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 DNTTIP1Q9H147 329 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 MYOZ1Q9NP98 299 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SNTG1Q9NSN8 517 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CLN6Q9NWW5 311 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 MGAT4CQ9UBM8 478 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 TBC1D29Q9UFV1 150 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CD84Q9UIB8 345 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SCP2D1Q9UJQ7 156 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 EXOSC1Q9Y3B2 195 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SNTNA6NMZ2 147 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 BHLHE40O14503 412 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 TSPAN19P0C672 248 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 MAPK3P27361 379 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CD82P27701 267 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 MAP3K8P41279 467 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ARHGDIAP52565 204 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SLC9A5Q14940 896 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 LPAL2Q16609 132 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 PRRT3Q5FWE3 981 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 HEPHL1Q6MZM0 1159 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF322Q6U7Q0 402 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 UBE3DQ7Z6J8 389 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 LYPD6Q86Y78 171 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 OR10G6Q8NH81 332 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 FBXW5Q969U6 566 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CCDC120Q96HB5 630 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 KCTD7Q96MP8 289 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 FCRL4Q96PJ5 515 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SLC38A2Q96QD8 506 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 PANX1Q96RD7 426 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 DPH7Q9BTV6 452 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF426Q9BUY5 554 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 GSX2Q9BZM3 304 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 STRADBQ9C0K7 418 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 PCBD2Q9H0N5 130 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ESRP2Q9H6T0 727 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ANKRA2Q9H9E1 313 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 BPIFA1Q9NP55 256 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 GLS2Q9UI32 602 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SPEF1Q9Y4P9 236 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 A0A1B0GUH1 482 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 GNGT2O14610 69 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 OGG1O15527 345 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 DUX1O43812 170 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SNAPC5O75971 98 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 GLAP06280 429 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 HEXAP06865 529 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 APEHP13798 732 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 FOLR2P14207 255 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ATP5A1P25705 553 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CCKBRP32239 447 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ACTR1BP42025 376 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 OR1E2P47887 323 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 GIPRP48546 466 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 CDH12P55289 794 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 ACTR1AP61163 376 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 SSTP61278 116 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 S100A12P80511 92 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 MAT1AQ00266 395 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 DOC2AQ14183 400 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 TRIP6Q15654 476 aaKnown RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 RSPO4Q2I0M5 234 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-205ENST00000514271 RASSF6Q6ZTQ3 369 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 BIVMQ86UB2 503 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 COMMD7Q86VX2 200 aa6.82□□□□□ -1.32
CLIP1-205ENST00000514271 TRIM48Q8IWZ4 208 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms