RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RXFP3Q9NSD7 469 aa13.66□□□□□ -0.22
VCAN-211ENST00000513984 RIIAD1A6NNX1 92 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 NDUFB5O43674 189 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 FADS1O60427 444 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 PPP1R3DO95685 299 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 LDOC1O95751 146 aaPredicted RBP13.65□□□□□ -0.22
VCAN-211ENST00000513984 LIMS3P0CW19 117 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 LIMS4P0CW20 117 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 EVI2BP34910 448 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 SOX3P41225 446 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 SLC1A3P43003 542 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 SERPINB10P48595 397 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 NRG3P56975 720 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 RPS4XP62701 263 aaKnown RBP13.65□□□□□ -0.22
VCAN-211ENST00000513984 MC2RQ01718 297 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 TMED1Q13445 227 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 ANGPT1Q15389 498 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 TCEAL6Q6IPX3 200 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 MEPCEQ7L2J0 689 aaKnown RBP13.65□□□□□ -0.22
VCAN-211ENST00000513984 CPEB2Q7Z5Q1 589 aaKnown RBP13.65□□□□□ -0.22
VCAN-211ENST00000513984 MARCH3Q86UD3 253 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 KBTBD8Q8NFY9 601 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 OR8K3Q8NH51 312 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 TCEAL3Q969E4 200 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 ZNF524Q96C55 264 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 LRFN5Q96NI6 719 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 DACH2Q96NX9 599 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 LPAR4Q99677 370 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 CRB3Q9BUF7 120 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 TBL1XR1Q9BZK7 514 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 ADAM19Q9H013 955 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 ARRDC1-AS1Q9H2J1 176 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 WDR54Q9H977 334 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 ISYNA1Q9NPH2 558 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 NDUFB11Q9NX14 153 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 CHRNA9Q9UGM1 479 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 ZNF337Q9Y3M9 751 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 PMF1-BGLAPU3KQ54 211 aa13.65□□□□□ -0.22
VCAN-211ENST00000513984 LOC100506127A0A0U1RQW1 187 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 PRR23D1E9PI22 279 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 J3QRE1 110 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 KHNYNO15037 678 aaKnown RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 HCRTR2O43614 444 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 GDF9O60383 454 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 NADKO95544 446 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 PRR23D2P0DMB1 279 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZNF3P17036 446 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 HK1P19367 917 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 SHFQ7M4L6 423 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 NUP54Q7Z3B4 507 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZBTB46Q86UZ6 589 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 AMER2Q8N7J2 671 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZNF485Q8NCK3 441 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 PSD4Q8NDX1 1056 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 OR4F15Q8NGB8 312 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 KISS1RQ969F8 398 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 SH3YL1Q96HL8 342 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 KLHDC3Q9BQ90 382 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 CHCHD6Q9BRQ6 235 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZNF649Q9BS31 505 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 CENPOQ9BU64 300 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 HCAR1Q9BXC0 346 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 SLIRPQ9GZT3 109 aaKnown RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 FBXO8Q9NRD0 319 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 C19orf25Q9UFG5 118 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 NXT1Q9UKK6 140 aaKnown RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 PCDHGA5Q9Y5G8 931 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 NPFFR2Q9Y5X5 522 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 LRRN3E7EW58 273 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ADAM10O14672 748 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 IFNGP01579 166 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 CPEP16870 476 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZNF28P17035 718 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 SLC2A5P22732 501 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 BMXP51813 675 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ITGADQ13349 1161 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 EFR3AQ14156 821 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZNF829Q3KNS6 432 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 GDPGP1Q6ZNW5 385 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ADCK1Q86TW2 530 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 PHC2Q8IXK0 858 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 SIRT6Q8N6T7 355 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 LRRC17Q8N6Y2 441 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 SLC37A3Q8NCC5 494 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ZNF563Q8TA94 476 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 ATOH1Q92858 354 aaPredicted RBP13.64□□□□□ -0.23
VCAN-211ENST00000513984 PTP4A1Q93096 173 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 MED20Q9H944 212 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 SEC14L4Q9UDX3 406 aa13.64□□□□□ -0.23
VCAN-211ENST00000513984 CCDC182A6NF36 153 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 SLC22A31A6NKX4 558 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 FLRT2O43155 660 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 GPX5O75715 221 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 TACR3P29371 465 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 SLC26A5P58743 744 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 EGR4Q05215 589 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 CRMP1Q14194 572 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 ZNF74Q16587 644 aa13.63□□□□□ -0.23
VCAN-211ENST00000513984 SOWAHCQ53LP3 525 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms