RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 IGKV3D-15A0A087WSY6 115 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 A0A1W2PNR3 127 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 ZNF724A8MTY0 619 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 EEF1E1-BLOC1S5C9J1V9 151 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 EEF1E1O43324 174 aaKnown RBP8.65□□□□□ -1.02
RNF4-221ENST00000513643 GOSR1O95249 250 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 SYNGR4O95473 234 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 PMS2P2O95744 297 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 NPPAP01160 153 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 TROVE2P10155 538 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNF4-221ENST00000513643 KLK2P20151 261 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 TACR3P29371 465 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 AGTR1P30556 359 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 CCKARP32238 428 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 RYKP34925 604 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 CD79BP40259 229 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 DIO1P49895 249 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 CCR4P51679 360 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 POLR2HP52434 150 aaKnown RBP8.65□□□□□ -1.02
RNF4-221ENST00000513643 CRYBA2P53672 197 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 RBBP4Q09028 425 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 MYBPHQ13203 477 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 LARS2Q15031 903 aaKnown RBP8.65□□□□□ -1.02
RNF4-221ENST00000513643 GCNT6Q5T4J0 391 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 GTF2IRD2BQ6EKJ0 949 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 NANOGP8Q6NSW7 305 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 C6orf89Q6UWU4 347 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 FCRLAQ7L513 359 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 DHDDSQ86SQ9 333 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 LUZP2Q86TE4 346 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 SERPINA11Q86U17 422 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 MTDHQ86UE4 582 aaKnown RBP8.65□□□□□ -1.02
RNF4-221ENST00000513643 GTF2IRD2Q86UP8 949 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 CALHM3Q86XJ0 350 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 SLC43A2Q8N370 569 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 TMCO5AQ8N6Q1 288 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 LSMEM1Q8N8F7 131 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 ABHD3Q8WU67 409 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 ARL5BQ96KC2 179 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 PSD2Q9BQI7 771 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 POTEKPQ9BYX7 375 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 NANOGQ9H9S0 305 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 SERINC1Q9NRX5 453 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 RASSF1Q9NS23 344 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 KLHL13Q9P2N7 655 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 ZNF232Q9UNY5 417 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 TESMINQ9Y4I5 508 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 VPS13CQ709C8 3753 aa8.65□□□□□ -1.02
RNF4-221ENST00000513643 ZNF469Q96JG9 3925 aaPredicted RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 TMED7-TICAM2A0A0A6YYA0 188 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TMEM72A0PK05 275 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZC3H12DA2A288 527 aaKnown RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 TUBAL3A6NHL2 446 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 A6NNC1 897 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZNF716A6NP11 495 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 EVPLLA8MZ36 301 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TMEM229AB2RXF0 380 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZNF814B7Z6K7 855 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ANGPT2O15123 496 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TPST1O60507 370 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TPST2O60704 377 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 PRKD3O94806 890 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 MFN2O95140 757 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 YES1P07947 543 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 VIMP08670 466 aaKnown RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 GKN3PP0CG01 181 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 IMPDH2P12268 514 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 NTF4P34130 210 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 UGT2B10P36537 528 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 SLC16A1P53985 500 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TRMT5Q32P41 509 aaKnown RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZNF311Q5JNZ3 666 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ABLIM2Q6H8Q1 611 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 WBP2NLQ6ICG8 309 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TFAP2EQ6VUC0 442 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 STAC2Q6ZMT1 411 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZNF550Q7Z398 422 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 NUFIP2Q7Z417 695 aaKnown RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 ATG4DQ86TL0 474 aaPredicted RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 TUSC5Q8IXB3 177 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 GABRG1Q8N1C3 465 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 CNEP1R1Q8N9A8 125 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 OR8J3Q8NGG0 315 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 NFKBIDQ8NI38 313 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZNF563Q8TA94 476 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 LINC01560Q8TB33 94 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 C3orf49Q96BT1 292 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 LRRC58Q96CX6 371 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 OR5B2Q96R09 309 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 ZNF559Q9BR84 538 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 OR10A4Q9H209 315 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 C12orf10Q9HB07 376 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 CLEC4AQ9UMR7 237 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 PROCRQ9UNN8 238 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 TMED7Q9Y3B3 224 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 EMC9Q9Y3B6 208 aa8.64□□□□□ -1.03
RNF4-221ENST00000513643 SPIN1Q9Y657 262 aaPredicted RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
RNF4-221ENST00000513643 TMEM247A6NEH6 219 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms