RNA–Protein interactions for RNA: ENST00000513439.5

MTRR-223, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, human

TSL 1 (best)

Gene MTRR, Length 2,441 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTRR-223	ENST00000513439	MRPS18A	Q9NVS2	196 aa	Known RBP	13.52	□□□□□ -0.25
MTRR-223	ENST00000513439	ZNF175	Q9Y473	711 aa		13.52	□□□□□ -0.25
MTRR-223	ENST00000513439		A0A0G2JPF8	293 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	C2orf92	A0A1B0GVN3	265 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	HNRNPCL2	B2RXH8	293 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	HNRNPCL3	B7ZW38	293 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	KRBOX1	C9JBD0	128 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	WDPCP	O95876	746 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	H1F0	P07305	194 aa	Known RBP	13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	HNRNPCL4	P0DMR1	293 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	ST6GAL1	P15907	406 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	LCN1	P31025	176 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	CD79B	P40259	229 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SRP9	P49458	86 aa	Known RBP	13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	B3GLCT	Q6Y288	498 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	OVCH2	Q7RTZ1	564 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	LRRC28	Q86X40	367 aa	Predicted RBP	13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	OR5M3	Q8NGP4	307 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SPATA5L1	Q9BVQ7	753 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	ACTRT3	Q9BYD9	372 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SEMA6C	Q9H3T2	930 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	LYRM4	Q9HD34	91 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	FBXL21	Q9UKT6	434 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	POMT2	Q9UKY4	750 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439		M0R3H8	397 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SSNA1	O43805	119 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	LIMS3	P0CW19	117 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	LIMS4	P0CW20	117 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	F8A1	P23610	371 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	STARD6	P59095	220 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	INSL4	Q14641	139 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	ELOC	Q15369	112 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	ST3GAL2	Q16842	350 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	NHLRC3	Q5JS37	347 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	ACSM5	Q6NUN0	579 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	FAM111B	Q6SJ93	734 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	USP53	Q70EK8	1073 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	OR5T3	Q8NGG3	340 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	OR2T35	Q8NGX2	323 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	MS4A3	Q96HJ5	214 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SLC6A15	Q9H2J7	730 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	THADA	Q6YHU6	1953 aa		13.51	□□□□□ -0.25
MTRR-223	ENST00000513439	SLC22A23	A1A5C7	686 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CD8B2	A6NJW9	211 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	TOX	O94900	526 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	EPPIN	O95925	133 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CD8B	P10966	210 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PEPD	P12955	493 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CPM	P14384	443 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	NME1	P15531	152 aa	Known RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CEL	P19835	753 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	GIPR	P48546	466 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PITPNB	P48739	271 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	ID2	Q02363	134 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	OPCML	Q14982	345 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	SHF	Q7M4L6	423 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	LHFPL3	Q86UP9	236 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	GPR135	Q8IZ08	494 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	ARL14	Q8N4G2	192 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	LMX1A	Q8TE12	382 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	ADAMTS14	Q8WXS8	1223 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CCDC3	Q9BQI4	270 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	QRSL1	Q9H0R6	528 aa	Known RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PRDM9	Q9NQV7	894 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	NTM	Q9P121	344 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	SDK1	Q7Z5N4	2213 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	SPAG17	Q6Q759	2223 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PRODH	O43272	600 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	GALR3	O60755	368 aa	Predicted RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	LDB3	O75112	727 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	UBXN7	O94888	489 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CTSB	P07858	339 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	C4BPB	P20851	252 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	GIF	P27352	417 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	RBMS1	P29558	406 aa	Known RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	RFX3	P48380	749 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PIN1	Q13526	163 aa	Predicted RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	GSG1	Q2KHT4	349 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	DEFB110	Q30KQ9	67 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	HACD4	Q5VWC8	232 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PRAMEF8	Q5VWM4	474 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PRAMEF7	Q5VXH5	474 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	LYPD4	Q6UWN0	246 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	RASSF6	Q6ZTQ3	369 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	UXS1	Q8NBZ7	420 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	BEST4	Q8NFU0	473 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CADM4	Q8NFZ8	388 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	ZG16B	Q96DA0	208 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	SLC35A4	Q96G79	324 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	DPYSL5	Q9BPU6	564 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	UQCC2	Q9BRT2	126 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	ZNF416	Q9BWM5	594 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	SLC38A1	Q9H2H9	487 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	CHRD	Q9H2X0	955 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	SCPEP1	Q9HB40	452 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	IL21R	Q9HBE5	538 aa		13.5	□□□□□ -0.25
MTRR-223	ENST00000513439	PCDHB16	Q9NRJ7	776 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms