RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TUBA1BP68363 451 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 C1DQ13901 141 aaKnown RBP12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 AADACL4Q5VUY2 407 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 NXNL2Q5VZ03 156 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZNF385CQ66K41 422 aaPredicted RBP12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 WBP2NLQ6ICG8 309 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 SMARCD3Q6STE5 483 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 TUBA1AQ71U36 451 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 NUP54Q7Z3B4 507 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 PPP1R3BQ86XI6 285 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 GID4Q8IVV7 300 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZNF441Q8N8Z8 693 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 OR4Q3Q8NH05 313 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 SAMD8Q96LT4 415 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 CDC6Q99741 560 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 JAM3Q9BX67 310 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 WWTR1Q9GZV5 400 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 LAT2Q9GZY6 243 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 UBQLN3Q9H347 655 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 HHATLQ9HCP6 504 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 ISYNA1Q9NPH2 558 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 SLC22A11Q9NSA0 550 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 CTSFQ9UBX1 484 aa12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 EXOSC1Q9Y3B2 195 aaKnown RBP12.02□□□□□ -0.49
DEPDC1B-206ENST00000512452 TMEM129A0AVI4 362 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 SAGE2PA6NJ88 616 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 A8MUA0 341 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 D6RAR5 112 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 HAX1O00165 279 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 BHLHE40O14503 412 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZNF264O43296 627 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 EIF4E2O60573 245 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 PTP4A3O75365 173 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 MYL12AP19105 171 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 IL12BP29460 328 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 SERPINB10P48595 397 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 UCNP55089 124 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 SKP2Q13309 424 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 AQP6Q13520 282 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 NNATQ16517 81 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 ANKDD1AQ495B1 522 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 ARMCX4Q5H9R4 360 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 KIRREL2Q6UWL6 708 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 GDPGP1Q6ZNW5 385 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 RTL4Q6ZR62 310 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 C9orf40Q8IXQ3 194 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 NANOGP1Q8N7R0 232 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZNF321PQ8N8H1 164 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 OR52I1Q8NGK6 324 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 OR8K3Q8NH51 312 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 PFN4Q8NHR9 129 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 GRHL3Q8TE85 626 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 TMEM43Q9BTV4 400 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 DPH1Q9BZG8 443 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 MEPEQ9NQ76 525 aaPredicted RBP12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 CHCHD3Q9NX63 227 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 NXT1Q9UKK6 140 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 SIGLEC7Q9Y286 467 aa12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 LSM2Q9Y333 95 aaKnown RBP12.01□□□□□ -0.49
DEPDC1B-206ENST00000512452 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 FBN3Q75N90 2809 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLEC18AA5D8T8 446 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 ALG1L2C9J202 215 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CCRL2O00421 344 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 MYL12BO14950 172 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CPNE3O75131 537 aaKnown RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 ALOX12BO75342 701 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLPXO76031 633 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 NTN1O95631 604 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 SCG5P05408 212 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 HEXBP07686 556 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 SPTBP11277 2137 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZNF182P17025 639 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 HTR1FP30939 366 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 SLC6A6P31641 620 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 LIPAP38571 399 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 GRK6P43250 576 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 MTNR1AP48039 350 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 RGS6P49758 472 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 EFNA3P52797 238 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 GAS1P54826 345 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CDH11P55287 796 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 ZFP36L1Q07352 338 aaKnown RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 MLLT11Q13015 90 aaPredicted RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 DCTN2Q13561 401 aaKnown RBP12□□□□□ -0.49
DEPDC1B-206ENST00000512452 SPCS2Q15005 226 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 MOGQ16653 247 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 DGUOKQ16854 277 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 ISXQ2M1V0 245 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CCDC157Q569K6 752 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLEC12AQ5QGZ9 265 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 PWWP2BQ6NUJ5 590 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 SLC30A6Q6NXT4 461 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 DBX2Q6ZNG2 339 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 ANKRD37Q7Z713 158 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 TMPRSS12Q86WS5 348 aa12□□□□□ -0.49
DEPDC1B-206ENST00000512452 CROCCP3Q8IVE0 287 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms