RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TRAPPC4Q9Y296 219 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 DICER1Q9UPY3 1922 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 PIRO00625 290 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SURF4O15260 269 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SNRNP70P08621 437 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 DRD5P21918 477 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 HTRA4P83105 476 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 COL19A1Q14993 1142 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TIGD5Q53EQ6 642 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 CATSPEREQ5SY80 951 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TMEM164Q5U3C3 297 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SPICQ8N5J4 248 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ZNF321PQ8N8H1 164 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 OR6F1Q8NGZ6 308 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ALOXE3Q9BYJ1 711 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 YTHDF2Q9Y5A9 579 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 A0A1W2PPV4 95 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 DVL1O14640 695 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 MGMTP16455 207 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TGM1P22735 817 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 DVL1P1P54792 670 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 CLLU1Q5K131 121 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 FRMPD2BQ6IN97 320 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 LEG1Q6P5S2 330 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 PSRC1Q6PGN9 363 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 ZC3H14Q6PJT7 736 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 JUNDP17535 347 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 C4orf17Q53FE4 359 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 OR1E3Q8WZA6 343 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 GSTO2Q9H4Y5 243 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 FUCA1P04066 466 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 GM2AP17900 193 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 PNRC1Q12796 327 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 P2RY14Q15391 338 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TAZQ16635 292 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 ARHGAP40Q5TG30 622 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 OR4K1Q8NGD4 311 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 OR4Q3Q8NH05 313 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 RYDENQ9NUL5 291 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 LSM5Q9Y4Y9 91 aaKnown RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 CXorf51AA0A1B0GTR3 108 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SNCGO76070 127 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 SMPD1P17405 629 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 TTLL10Q6ZVT0 673 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 WDR5BQ86VZ2 330 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ANKRD9Q96BM1 317 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 NDUFB11Q9NX14 153 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ELOA3CA0A087WX78 387 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 ACVRL1P37023 503 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 STK19P49842 368 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 FAM182BQ5T319 152 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ADIPOR2Q86V24 386 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 TMEM102Q8N9M5 508 aaPredicted RBP7.86□□□□□ -1.15
HTT-208ENST00000510626 SYT11Q9BT88 431 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 C20orf85Q9H1P6 137 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 DZANK1Q9NVP4 752 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 ASH2LQ9UBL3 628 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 FAM166BA8MTA8 275 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 MAFKO60675 156 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 NAGAP17050 411 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 GDNFP39905 211 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 RAB28P51157 221 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 RAB8BQ92930 207 aa7.86□□□□□ -1.15
HTT-208ENST00000510626 PER3P56645 1201 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 COX19Q49B96 90 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 EOGTQ5NDL2 527 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SEZ6L2Q6UXD5 910 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SPNS1Q9H2V7 528 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 ARNT2Q9HBZ2 717 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 ZNF225Q9UK10 706 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 STK17BO94768 372 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 HTR4Q13639 388 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 C2orf73Q8N5S3 287 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 OR10Q1Q8NGQ4 319 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 JSRP1Q96MG2 331 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 JAM3Q9BX67 310 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 NCDNQ9UBB6 729 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 RHCGQ9UBD6 479 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 MYO16Q9Y6X6 1858 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 CNOT1A5YKK6 2376 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 A0A1B0GUH1 482 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 ANXA7P20073 488 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 SSX7Q7RTT5 188 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 ZNF586Q9NXT0 402 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 EXO1Q9UQ84 846 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 DVL2O14641 736 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 TPOP07202 933 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 HLA-DOBP13765 273 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 MRPL19P49406 292 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 NADSYN1Q6IA69 706 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 OR51L1Q8NGJ5 315 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 ST8SIA4Q92187 359 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 UBL7Q96S82 380 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 A4GALTQ9NPC4 353 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SMCHD1A6NHR9 2005 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SMIM18P0DKX4 95 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms