RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 P2RY6Q15077 328 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 BEX5Q5H9J7 111 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 SLC2A7Q6PXP3 512 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 MTDHQ86UE4 582 aaKnown RBP16.6■□□□□ 0.25
UBE3D-207ENST00000509102 SLC38A5Q8WUX1 472 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 SPDL1Q96EA4 605 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 AURKBQ96GD4 344 aaPredicted RBP16.6■□□□□ 0.25
UBE3D-207ENST00000509102 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 PSD2Q9BQI7 771 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 EBF4Q9BQW3 602 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 NGBQ9NPG2 151 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 CCDC167Q9P0B6 97 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 IFT52Q9Y366 437 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 PCDHB14Q9Y5E9 798 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 AKAP9Q99996 3911 aa16.6■□□□□ 0.25
UBE3D-207ENST00000509102 A0A096LPI6 279 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 TMED7-TICAM2A0A0A6YYA0 188 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 ZNF724A8MTY0 619 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 DEFB108AA8MXU0 73 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 ATE1O95260 518 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 THBS1P07996 1170 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 TFPTP0C1Z6 253 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 H2AFXP16104 143 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-207ENST00000509102 CCNA2P20248 432 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 FPR1P21462 350 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 MVDP53602 400 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 SQLEQ14534 574 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 RGNQ15493 299 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 DEFB113Q30KQ7 82 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 GTDC1Q4AE62 458 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 NUFIP2Q7Z417 695 aaKnown RBP16.59■□□□□ 0.25
UBE3D-207ENST00000509102 GALNT5Q7Z7M9 940 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 CXorf67Q86X51 503 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-207ENST00000509102 ZNF100Q8IYN0 542 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 PIGXQ8TBF5 258 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 CKAP2Q8WWK9 683 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 KISS1RQ969F8 398 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-207ENST00000509102 TMEM19Q96HH6 336 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 PAIP1Q9H074 479 aaKnown RBP16.59■□□□□ 0.25
UBE3D-207ENST00000509102 TRIM33Q9UPN9 1127 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 TMED7Q9Y3B3 224 aa16.59■□□□□ 0.25
UBE3D-207ENST00000509102 TEP1Q99973 2627 aaKnown RBP16.59■□□□□ 0.25
UBE3D-207ENST00000509102 CDHR4A6H8M9 788 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 AP3D1O14617 1153 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 GPR171O14626 319 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF208O43345 1280 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 EIF1BO60739 113 aaKnown RBP16.58■□□□□ 0.24
UBE3D-207ENST00000509102 NCF2P19878 526 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-207ENST00000509102 CXCR1P25024 350 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 TACR3P29371 465 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 ATP4BP51164 291 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 OR2B6P58173 313 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 EPS8Q12929 822 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 RNF220Q5VTB9 566 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 PRAMEF8Q5VWM4 474 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 PRAMEF7Q5VXH5 474 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 BLOC1S3Q6QNY0 202 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 ADGRG3Q86Y34 549 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 WFDC8Q8IUA0 241 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 BEX4Q9NWD9 120 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-207ENST00000509102 TMEM181Q9P2C4 612 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 CORO2BQ9UQ03 480 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 TRAPPC4Q9Y296 219 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF443Q9Y2A4 671 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-207ENST00000509102 DSPPQ9NZW4 1301 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 HIVEP1P15822 2718 aa16.58■□□□□ 0.24
UBE3D-207ENST00000509102 OR3A2P47893 321 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 SLC35A1P78382 337 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 PDK3Q15120 406 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 AGKQ53H12 422 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 SFRP5Q5T4F7 317 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 WBP2NLQ6ICG8 309 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF836Q6ZNA1 936 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 Q6ZT83 130 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 VRK2Q86Y07 508 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 GABRG1Q8N1C3 465 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 BBS10Q8TAM1 723 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 STON2Q8WXE9 905 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 PIGTQ969N2 578 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 SIKE1Q9BRV8 207 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 NAA11Q9BSU3 229 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-207ENST00000509102 OR11A1Q9GZK7 315 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 UBTD1Q9HAC8 227 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 A4GALTQ9NPC4 353 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 RLIMQ9NVW2 624 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 OSGIN1Q9UJX0 560 aa16.57■□□□□ 0.24
UBE3D-207ENST00000509102 EVPLLA8MZ36 301 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 CNOT4O95628 575 aaKnown RBP16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ADAP00813 363 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 PLAURQ03405 335 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ITGADQ13349 1161 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ZNF311Q5JNZ3 666 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 RPS26P11Q5JNZ5 115 aaPredicted RBP16.56■□□□□ 0.24
UBE3D-207ENST00000509102 LRIF1Q5T3J3 769 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ABLIM2Q6H8Q1 611 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 ALKBH2Q6NS38 261 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 C20orf204Q6ZNR8 217 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 SSX8Q7RTT4 187 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 KRT73Q86Y46 540 aa16.56■□□□□ 0.24
UBE3D-207ENST00000509102 CADM2Q8N3J6 435 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms