RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 PEX5LQ8IYB4 626 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 GABRG1Q8N1C3 465 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 SLC25A43Q8WUT9 341 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 OIT3Q8WWZ8 545 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 ZDHHC16Q969W1 377 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 PLPPR2Q96GM1 343 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 MTHFD2LQ9H903 347 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 GPR52Q9Y2T5 361 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 TMED7Q9Y3B3 224 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 SPIN1Q9Y657 262 aaPredicted RBP13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 PRR14LQ5THK1 2151 aa13.15□□□□□ -0.3
UBE2D3-228ENST00000508974 FLNAP21333 2647 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 DSCAMO60469 2012 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 ZNF814B7Z6K7 855 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 NR5A2O00482 541 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 KLF4O43474 513 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 LYZL6O75951 148 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 PLAUP00749 431 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 IGHV3-9P01782 118 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 ZCCHC18P0CG32 403 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 PPP3CBP16298 524 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 PSMB1P20618 241 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 RPS4Y1P22090 263 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 LOXP28300 417 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 TACR3P29371 465 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 OR2B6P58173 313 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 BEX5Q5H9J7 111 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 CMIPQ8IY22 773 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 OR52P1PQ8NH57 321 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 SLC38A5Q8WUX1 472 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 GTF2H4Q92759 462 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 TMEM19Q96HH6 336 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 CCL19Q99731 98 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 TMUB1Q9BVT8 246 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 PAIP1Q9H074 479 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 GP6Q9HCN6 339 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 CCDC167Q9P0B6 97 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 PCDHB14Q9Y5E9 798 aa13.14□□□□□ -0.31
UBE2D3-228ENST00000508974 TMEM72A0PK05 275 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 CFAP73A6NFT4 308 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 RAMP1O60894 148 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 TFPTP0C1Z6 253 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 OR3A2P47893 321 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 POLR2HP52434 150 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 CRISP3P54108 245 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 EPS8Q12929 822 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 CAPRIN1Q14444 709 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 STK11Q15831 433 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ACKR1Q16570 336 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 LIN52Q52LA3 116 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 AP1ARQ63HQ0 302 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ABLIM2Q6H8Q1 611 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 MSANTD1Q6ZTZ1 278 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ATG4DQ86TL0 474 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 MTDHQ86UE4 582 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 CCDC103Q8IW40 242 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ZNF100Q8IYN0 542 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 STEAP2Q8NFT2 490 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 KISS1RQ969F8 398 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 MAL2Q969L2 176 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ZHX1-C8orf76Q96EF9 292 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 TACO1Q9BSH4 297 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 INTS9Q9NV88 658 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 BEX4Q9NWD9 120 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 CALML5Q9NZT1 146 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 OSGIN1Q9UJX0 560 aa13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ZNF443Q9Y2A4 671 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-228ENST00000508974 ZC3H12DA2A288 527 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 CDHR4A6H8M9 788 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 TMEM247A6NEH6 219 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 CLIC1O00299 241 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 SMPD2O60906 423 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 PMS2P2O95744 297 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 PRG2P13727 222 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 UQCRBP14927 111 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 SLC1A3P43003 542 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 RGNQ15493 299 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 TAB1Q15750 504 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 ZNF704Q6ZNC4 412 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 BHLHA15Q7RTS1 189 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 HDXQ7Z353 690 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 FUNDC1Q8IVP5 155 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 UBE2J2Q8N2K1 259 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 DDIT4LQ96D03 193 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 SLAMF8Q9P0V8 285 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 TMEM181Q9P2C4 612 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 NOSIPQ9Y314 301 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 DSPPQ9NZW4 1301 aa13.12□□□□□ -0.31
UBE2D3-228ENST00000508974 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-228ENST00000508974 ZNF716A6NP11 495 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms