RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SSTR4P31391 388 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 GCGRP47871 477 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 CAV3P56539 151 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 C19orf57Q0VDD7 668 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 EFR3AQ14156 821 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 GALEQ14376 348 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 AMZ1Q400G9 498 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF57Q68EA5 555 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 ZCCHC12Q6PEW1 402 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SMARCD3Q6STE5 483 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TMEM91Q6ZNR0 172 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SHFQ7M4L6 423 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 CDH24Q86UP0 819 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 SLC35F3Q8IY50 421 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 ZFP41Q8N8Y5 198 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 TTC9Q92623 222 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 RNF32Q9H0A6 362 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 HINT3Q9NQE9 182 aaKnown RBP10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 FBXO34Q9NWN3 711 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 STMN3Q9NZ72 180 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 PTTG3PQ9NZH4 202 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 NLKQ9UBE8 527 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 WDR45Q9Y484 360 aa10.16□□□□□ -0.78
SH3RF1-203ENST00000508685 A0A087WV62 115 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 DAPL1A0PJW8 107 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 HRKO00198 91 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 PLPP2O43688 288 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 OR10H2O60403 315 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 CH25HO95992 272 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 AK1P00568 194 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 GIMD1P0DJR0 217 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 ARSBP15848 533 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 HK1P19367 917 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 NPR2P20594 1047 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 GPR4P46093 362 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 FNTBP49356 437 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 BTG2P78543 158 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 POU4F2Q12837 409 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 P2RY14Q15391 338 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 GPR68Q15743 365 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 ZNF791Q3KP31 576 aaPredicted RBP10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 WDR45BQ5MNZ6 344 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 PYHIN1Q6K0P9 492 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 NIPAL3Q6P499 406 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 OAFQ86UD1 273 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 MEX3DQ86XN8 651 aaKnown RBP10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 LNX2Q8N448 690 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 MS4A15Q8N5U1 240 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 RFT1Q96AA3 541 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 CTHRC1Q96CG8 243 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 MMABQ96EY8 250 aaPredicted RBP10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 SENP5Q96HI0 755 aaPredicted RBP10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 SAMD8Q96LT4 415 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 HS6ST2Q96MM7 605 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 SDF2Q99470 211 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 NDC1Q9BTX1 674 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 ALG8Q9BVK2 526 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 SPRTNQ9H040 489 aaPredicted RBP10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 HDHD2Q9H0R4 259 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 PIGUQ9H490 435 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 PDE7BQ9NP56 450 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 C14orf105Q9NVL8 296 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 COPZ2Q9P299 210 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 EXTL2Q9UBQ6 330 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 NPFFR2Q9Y5X5 522 aa10.15□□□□□ -0.78
SH3RF1-203ENST00000508685 ARID1BQ8NFD5 2236 aaPredicted RBP10.15□□□□□ -0.79
SH3RF1-203ENST00000508685 IGHV1OR21-1A0A087WYE8 117 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 NPIPA5A0A0B4J1W7 369 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CD8B2A6NJW9 211 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 C12orf71A8MTZ7 269 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 NPIPA7E9PJI5 369 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 HRO43593 1189 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF780AO75290 641 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CBX7O95931 251 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SERPINA3P01011 423 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 NPIPA8P0DM63 369 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CD8BP10966 210 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PEPDP12955 493 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 RNH1P13489 461 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ELK1P19419 428 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 MAOAP21397 527 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC6A1P30531 599 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CD79BP40259 229 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PITPNBP48739 271 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ACTC1P68032 377 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ACTA1P68133 377 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PITPNAQ00169 270 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CFHR1Q03591 330 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CSTF1Q05048 431 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 MAPK14Q16539 360 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SNAP47Q5SQN1 464 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 DCST2Q5T1A1 773 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 IDNKQ5T6J7 187 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 FIGNL1Q6PIW4 674 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZC3H14Q6PJT7 736 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 BAIAP2L2Q6UXY1 529 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF836Q6ZNA1 936 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 TMPRSS11FQ6ZWK6 438 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 VASH1Q7L8A9 365 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms