RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 HOXC4P09017 264 aaPredicted RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 MAT2AP31153 395 aaKnown RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 GABRA3P34903 492 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 MAP3K8P41279 467 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SOX9P48436 509 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 AP2S1P53680 142 aaPredicted RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 HSF2Q03933 536 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 GSG1Q2KHT4 349 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 PRICKLE4Q2TBC4 344 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 TP53I3Q53FA7 332 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 FAM69AQ5T7M9 428 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SIGIRRQ6IA17 410 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SSX6Q7RTT6 188 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 GRAMD2AQ8IUY3 354 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SLITRK4Q8IW52 837 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 FAM98AQ8NCA5 519 aaKnown RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 OR13C5Q8NGS8 318 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 FLVCR1-AS1Q8TAF5 88 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 ZNF671Q8TAW3 534 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 GIMAP1Q8WWP7 306 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 DACT3Q96B18 629 aaPredicted RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 TNFRSF13CQ96RJ3 184 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SFXN1Q9H9B4 322 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 USP36Q9P275 1121 aaKnown RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 FBXL4Q9UKA2 621 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 PCOLCE2Q9UKZ9 415 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 COL4A2P08572 1712 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 MEIKINA0A087WXM9 373 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 GXYLT2A0PJZ3 443 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 ZNF860A6NHJ4 632 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 ZNF749O43361 778 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 CTSVO60911 334 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 LDB3O75112 727 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 TMEM127O75204 238 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 EML2O95834 649 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 TYRP1P17643 537 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SNRPNP63162 240 aaKnown RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 SIRPAP78324 504 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SNTB2Q13425 540 aaKnown RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 KLF9Q13886 244 aaPredicted RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 CDONQ4KMG0 1287 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 PRRT3Q5FWE3 981 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 FIGLAQ6QHK4 219 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 ZNF680Q8NEM1 530 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 SNX33Q8WV41 574 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 PELI1Q96FA3 418 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 RADILQ96JH8 1075 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 ERMAPQ96PL5 475 aaPredicted RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 ZFYVE21Q9BQ24 234 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 GSDMCQ9BYG8 508 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
CAST-223ENST00000508608 MCCC2Q9HCC0 563 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 NRIP3Q9NQ35 241 aa12.03□□□□□ -0.48
CAST-223ENST00000508608 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 LOC105369274A0A096LPK9 316 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TRABD2BA6NFA1 517 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 GPR171O14626 319 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 SSNA1O43805 119 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 GPRIN2O60269 458 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 ICMTO60725 284 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 NKX2-2O95096 273 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 NDUFB2O95178 105 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 ADPRHP54922 357 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 SRP54P61011 504 aaKnown RBP12.02□□□□□ -0.48
CAST-223ENST00000508608 EXOSC7Q15024 291 aaKnown RBP12.02□□□□□ -0.48
CAST-223ENST00000508608 RNASE12Q5GAN4 147 aaKnown RBP12.02□□□□□ -0.48
CAST-223ENST00000508608 ALG10BQ5I7T1 473 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 SLC35F2Q8IXU6 374 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.48
CAST-223ENST00000508608 OR4N4Q8N0Y3 316 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 ZNF614Q8N883 585 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 OR52E2Q8NGJ4 325 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 CNOT9Q92600 299 aaKnown RBP12.02□□□□□ -0.48
CAST-223ENST00000508608 FAM131CQ96AQ9 280 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 FLRT3Q9NZU0 649 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.48
CAST-223ENST00000508608 TRBV2A0A0J9YWF9 115 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 A0A1B0GTQ1 180 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 PDCD5O14737 125 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 SLC31A1O15431 190 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 PRAF2O60831 178 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 ECDO95905 644 aaPredicted RBP12.02□□□□□ -0.49
CAST-223ENST00000508608 IFNA7P01567 189 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 GUSBP08236 651 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 CXCL3P19876 107 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 CCR6P51684 374 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 AP3S2P59780 193 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 ZSWIM7Q19AV6 140 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 FCRL6Q6DN72 434 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 SPRED2Q7Z698 418 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 SDR9C7Q8NEX9 313 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
CAST-223ENST00000508608 LGALS14Q8TCE9 139 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms