RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 C9orf135Q5VTT2 229 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 KANK2Q63ZY3 851 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 C17orf78Q8N4C9 275 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 NATD1Q8N6N6 113 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 OR52E4Q8NGH9 312 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 UPB1Q9UBR1 384 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 AMDHD2Q9Y303 409 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 DNAJC15Q9Y5T4 150 aa15.75■□□□□ 0.11
CLDND1-217ENST00000508071 ATP6V1G2-DDX39BF2Z307 99 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 ANKRD28O15084 1053 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 CFLARO15519 480 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 DNPH1O43598 174 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 TGFAP01135 160 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 NTF4P34130 210 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 APOBEC1P41238 236 aaKnown RBP15.74■□□□□ 0.11
CLDND1-217ENST00000508071 MAGEA8P43361 318 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 SLC16A1P53985 500 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 ZNF141Q15928 474 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 BHLHB9Q6PI77 547 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 CASP12Q6UXS9 341 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 EIF3MQ7L2H7 374 aaKnown RBP15.74■□□□□ 0.11
CLDND1-217ENST00000508071 HOMEZQ8IX15 550 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 C1orf162Q8NEQ5 155 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-217ENST00000508071 OR5AK3PQ8NH89 298 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 ZNF563Q8TA94 476 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 DNAJA3Q96EY1 480 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 PRPF18Q99633 342 aaKnown RBP15.74■□□□□ 0.11
CLDND1-217ENST00000508071 MYOZ1Q9NP98 299 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-217ENST00000508071 SLC17A5Q9NRA2 495 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 CTPS2Q9NRF8 586 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 CHRNA9Q9UGM1 479 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 DCTN4Q9UJW0 460 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 HDGFL3Q9Y3E1 203 aa15.74■□□□□ 0.11
CLDND1-217ENST00000508071 IGHV4-61A0A0C4DH41 118 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 LOC390937A0A1W2PQ73 354 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 DUXAA6NLW8 204 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 PDLIM1O00151 329 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 STX11O75558 287 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 AK1P00568 194 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 CRHR1P34998 444 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 SOAT1P35610 550 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 OR2B6P58173 313 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 SNRPD2P62316 118 aaKnown RBP15.73■□□□□ 0.11
CLDND1-217ENST00000508071 RPS26P62854 115 aaKnown RBP15.73■□□□□ 0.11
CLDND1-217ENST00000508071 TGFBR3Q03167 851 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 SWI5Q1ZZU3 235 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 CCDC103Q8IW40 242 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 MNS1Q8NEH6 495 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 TWIST2Q8WVJ9 160 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 ARL5BQ96KC2 179 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 PPP3R2Q96LZ3 170 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 FOXN4Q96NZ1 517 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 SORCS2Q96PQ0 1159 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 C12orf65Q9H3J6 166 aaKnown RBP15.73■□□□□ 0.11
CLDND1-217ENST00000508071 PARPBPQ9NWS1 579 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 KCNE5Q9UJ90 142 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 MKLN1Q9UL63 735 aa15.73■□□□□ 0.11
CLDND1-217ENST00000508071 CENPVL1A0A0U1RR11 272 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 FCMRO60667 390 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 LYPLA1O75608 230 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-217ENST00000508071 WNT11O96014 354 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 MATN1P21941 496 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 FKBP2P26885 142 aaKnown RBP15.72■□□□□ 0.11
CLDND1-217ENST00000508071 PRPS1P60891 318 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 SLC25A3Q00325 362 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 PTGR1Q14914 329 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 MST1LQ2TV78 715 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 C1QTNF12Q5T7M4 302 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 KLHL24Q6TFL4 600 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 C10orf107Q8IVU9 208 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 RFLNBQ8N5W9 214 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 VRK1Q99986 396 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-217ENST00000508071 CCDC106Q9BWC9 280 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 GATA5Q9BWX5 397 aaPredicted RBP15.72■□□□□ 0.11
CLDND1-217ENST00000508071 GIMAP2Q9UG22 337 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 MID2Q9UJV3 735 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 MOKQ9UQ07 419 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 SLC9A8Q9Y2E8 581 aa15.72■□□□□ 0.11
CLDND1-217ENST00000508071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLDND1-217ENST00000508071 COPEO14579 308 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 PIP5K1BO14986 540 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 TCF21O43680 179 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 PEX11AO75192 247 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 UGT2B17O75795 530 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 ZNF23P17027 643 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 RYKP34925 604 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 CLK1P49759 484 aaKnown RBP15.71■□□□□ 0.11
CLDND1-217ENST00000508071 CR1LQ2VPA4 569 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 ARHGAP11BQ3KRB8 267 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 C16orf62Q7Z3J2 963 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 SLC46A3Q7Z3Q1 461 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 GRINAQ7Z429 371 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 ZNF540Q8NDQ6 660 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 COQ8BQ96D53 544 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 OR11A1Q9GZK7 315 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 SLC7A10Q9NS82 523 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 TMEM181Q9P2C4 612 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 SLC35A3Q9Y2D2 325 aa15.71■□□□□ 0.11
CLDND1-217ENST00000508071 TMEM233B4DJY2 109 aa15.7■□□□□ 0.1
CLDND1-217ENST00000508071 TRIM13O60858 407 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms