RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SRP9P49458 86 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 GDI2P50395 445 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 RAB28P51157 221 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MECP2P51608 486 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CCR6P51684 374 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 EPHA5P54756 1037 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR10A3P58181 314 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 VSX2P58304 361 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 RAB8AP61006 207 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ERVK-21P61565 698 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SSBP1Q04837 148 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 FUT5Q11128 374 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 GK2Q14410 553 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ELAVL3Q14576 367 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CDK5R1Q15078 307 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 AMZ1Q400G9 498 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TCTE1Q5JU00 501 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC35D3Q5M8T2 416 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PXDC1Q5TGL8 231 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 METRNLQ641Q3 311 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC6A19Q695T7 634 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MRM1Q6IN84 353 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MFSD12Q6NUT3 480 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM180BQ6P0A1 224 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ABHD17CQ6PCB6 329 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZCCHC12Q6PEW1 402 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF613Q6PF04 617 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 IL20RBQ6UXL0 311 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 GLDNQ6ZMI3 551 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ERN2Q76MJ5 926 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 LINGO2Q7L985 606 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CHMP1BQ7LBR1 199 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 KRT77Q7Z794 578 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 UBE2Q1Q7Z7E8 422 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 C11orf96Q7Z7L8 435 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 NR2C2APQ86WQ0 139 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF547Q8IVP9 402 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 NKAIN4Q8IVV8 208 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PDZD9Q8IXQ8 264 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF619Q8N2I2 560 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 LRRC25Q8N386 305 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACOT4Q8N9L9 421 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 BBS1Q8NFJ9 593 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 VN1R2Q8NFZ6 395 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR6C4Q8NGE1 309 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MOSPD2Q8NHP6 518 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMAP2Q8WU79 429 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CYB5D2Q8WUJ1 264 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM255BQ8WV15 326 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CCDC107Q8WV48 283 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM239Q8WW34 195 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 GHSRQ92847 366 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MS4A6EQ96DS6 147 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 GIMAP5Q96F15 307 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ELMOD3Q96FG2 381 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 RBM18Q96H35 190 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 DOCK6Q96HP0 2047 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SPACA7Q96KW9 195 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ART5Q96L15 291 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SFXN2Q96NB2 322 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2A7Q96R45 310 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CNN2Q99439 309 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBX5Q99593 518 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TEAD3Q99594 435 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 YIPF4Q9BSR8 244 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SARGQ9BW04 601 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 RSPO3Q9BXY4 272 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 GSDMCQ9BYG8 508 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SHARPINQ9H0F6 387 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 DNTTIP1Q9H147 329 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 LDAHQ9H6V9 325 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMEM27Q9HBJ8 222 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ADGRL4Q9HBW9 690 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 HRASLSQ9HDD0 168 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 MRPS30Q9NP92 439 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 TAS2R10Q9NYW0 307 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR6C2Q9NZP2 312 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 UPB1Q9UBR1 384 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF69Q9UC07 566 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLAGL1Q9UM63 463 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 SCML1Q9UN30 329 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PPIEQ9UNP9 301 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 WDR45Q9Y484 360 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CHST2Q9Y4C5 530 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 PCDHGA9Q9Y5G4 932 aaKnown RBP4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 IRAK3Q9Y616 596 aa4.59□□□□□ -1.67
HMGB3P16-201ENST00000508037 CCDC88CQ9P219 2028 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TRBV2A0A0J9YWF9 115 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 A0A1W2PPV9 198 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 A0A1W2PR48 441 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CIB4A0PJX0 185 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ANKRD20A5PA0PJZ0 165 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FAM183AA6NL82 134 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 IFITM5A6NNB3 132 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 A8MXK9 166 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 MCRIP1C9JLW8 97 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TEX46H3BTG2 121 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms