RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 ZNF443Q9Y2A4 671 aaPredicted RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 IFT52Q9Y366 437 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
CLDND1-211ENST00000506575 MAP1AP78559 2803 aaPredicted RBP13.88□□□□□ -0.19
CLDND1-211ENST00000506575 TMED7-TICAM2A0A0A6YYA0 188 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 A0A1W2PP18 115 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 CDHR4A6H8M9 788 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 SMAD9O15198 467 aaKnown RBP13.87□□□□□ -0.19
CLDND1-211ENST00000506575 CYTIPO60759 359 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 ADAM11O75078 769 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 THBS1P07996 1170 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 NUDT7P0C024 238 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 PPP3CBP16298 524 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 HOXB9P17482 250 aaPredicted RBP13.87□□□□□ -0.19
CLDND1-211ENST00000506575 TACR3P29371 465 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 CCKARP32238 428 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 ZNF311Q5JNZ3 666 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 PAGE3Q5JUK9 113 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 RNF220Q5VTB9 566 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 PRAMEF8Q5VWM4 474 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 PRAMEF7Q5VXH5 474 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 ANKRD34AQ69YU3 496 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 NUFIP2Q7Z417 695 aaKnown RBP13.87□□□□□ -0.19
CLDND1-211ENST00000506575 ADGRG3Q86Y34 549 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 BBS10Q8TAM1 723 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 MAL2Q969L2 176 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 PSD2Q9BQI7 771 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 LIME1Q9H400 295 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 SLC25A37Q9NYZ2 338 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 SLAMF8Q9P0V8 285 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 PRDM4Q9UKN5 801 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 TMED7Q9Y3B3 224 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 F8P00451 2351 aa13.87□□□□□ -0.19
CLDND1-211ENST00000506575 EVPLLA8MZ36 301 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 ANGPT2O15123 496 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 DNPH1O43598 174 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 PMS2P2O95744 297 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 GKN3PP0CG01 181 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 BMP2P12643 396 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 CXCR1P25024 350 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 MAP2K6P52564 334 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 ART1P52961 327 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 IST1P53990 364 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 HSP90B2PQ58FF3 399 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 GCNT6Q5T4J0 391 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 STAC2Q6ZMT1 411 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 MTDHQ86UE4 582 aaKnown RBP13.86□□□□□ -0.19
CLDND1-211ENST00000506575 MSRB3Q8IXL7 192 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 CADM2Q8N3J6 435 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 DNAJA3Q96EY1 480 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 ARL5BQ96KC2 179 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 SPATA9Q9BWV2 254 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 OR11A1Q9GZK7 315 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 BCO1Q9HAY6 547 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 BCL2L10Q9HD36 194 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 SLC52A3Q9NQ40 469 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 CCM2LQ9NUG4 571 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-211ENST00000506575 EMC3Q9P0I2 261 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 VAPAQ9P0L0 249 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 C6orf203Q9P0P8 240 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-211ENST00000506575 LEF1Q9UJU2 399 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-211ENST00000506575 OSGIN1Q9UJX0 560 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 PLEKHA6Q9Y2H5 1048 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 FREM1Q5H8C1 2179 aa13.86□□□□□ -0.19
CLDND1-211ENST00000506575 TMEM72A0PK05 275 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 ZNF208O43345 1280 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 TROVE2P10155 538 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLDND1-211ENST00000506575 CD1EP15812 388 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 CRYGSP22914 178 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 OR2B6P58173 313 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 KEAP1Q14145 624 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 WBP2NLQ6ICG8 309 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 PAMR1Q6UXH9 720 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 TFAP2EQ6VUC0 442 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 GALNT5Q7Z7M9 940 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 KRT73Q86Y46 540 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 CLIP4Q8N3C7 705 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 NFKBIDQ8NI38 313 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 PIK3IP1Q96FE7 263 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 HDHD5Q9BXW7 423 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 ACTR6Q9GZN1 396 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 ZNF446Q9NWS9 450 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 TMEM181Q9P2C4 612 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 TRAPPC4Q9Y296 219 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 GPR52Q9Y2T5 361 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 NDUFAF1Q9Y375 327 aa13.85□□□□□ -0.19
CLDND1-211ENST00000506575 HIVEP1P15822 2718 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 ITPR3Q14573 2671 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 ZNF724A8MTY0 619 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 PGM3O95394 542 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 RAF1P04049 648 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 ARAFP10398 606 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 ETS2P15036 469 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 KLK2P20151 261 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 PSMB1P20618 241 aaKnown RBP13.84□□□□□ -0.19
CLDND1-211ENST00000506575 IL32P24001 234 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
CLDND1-211ENST00000506575 SLC35A1P78382 337 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 CDK6Q00534 326 aa13.84□□□□□ -0.19
CLDND1-211ENST00000506575 TESK1Q15569 626 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms