RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ASCL1P50553 236 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 POLR2HP52434 150 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 VWA1Q6PCB0 445 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 ARMC8Q8IUR7 673 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 CADM2Q8N3J6 435 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 SMYD1Q8NB12 490 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 GPR32P1Q8NGA4 272 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 SLC25A43Q8WUT9 341 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 ROBO4Q8WZ75 1007 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 REXO5Q96IC2 774 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 ARL5BQ96KC2 179 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 CCT8L2Q96SF2 557 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 ECSITQ9BQ95 431 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 ENKD1Q9H0I2 346 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 CLEC4AQ9UMR7 237 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 TMED7Q9Y3B3 224 aa16.32■□□□□ 0.2
PDLIM7-216ENST00000506537 PRORSD1PA6NEY8 169 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 EEF1E1-BLOC1S5C9J1V9 151 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 M0QX08 132 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 EEF1E1O43324 174 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 SHOX2O60902 331 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 SERPINB7O75635 380 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 CRHP06850 196 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 HTR2AP28223 471 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 PRDX6P30041 224 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 SIRPAP78324 504 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 FBXL19-AS1Q494R0 122 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 WBP2NLQ6ICG8 309 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 SLC30A8Q8IWU4 369 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 CNEP1R1Q8N9A8 125 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 RNF128Q8TEB7 428 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 CPNE4Q96A23 557 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 C3orf49Q96BT1 292 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 STARD4Q96DR4 205 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 DNAJA3Q96EY1 480 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 PRRG4Q9BZD6 226 aa16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 SPIN1Q9Y657 262 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-216ENST00000506537 IGHV3-15A0A0B4J1V0 119 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 ZC3H12DA2A288 527 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 FAM220BPB1ANY3 271 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 CD247P20963 164 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 ENPP1P22413 925 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 DIO1P49895 249 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 NUDT2P50583 147 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 RAC3P60763 192 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 MYBPHQ13203 477 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 DUSP7Q16829 419 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 HACD2Q6Y1H2 254 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 TMPPEQ6ZT21 453 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 BTLAQ7Z6A9 289 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 PATL1Q86TB9 770 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 SLC15A3Q8IY34 581 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 ABHD3Q8WU67 409 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 CMTM5Q96DZ9 223 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 PRR14Q9BWN1 585 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 EFCAB1Q9HAE3 211 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 TIGARQ9NQ88 270 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 PACSIN3Q9UKS6 424 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 PKDREJQ9NTG1 2253 aa16.3■□□□□ 0.2
PDLIM7-216ENST00000506537 ITPR2Q14571 2701 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 NME4O00746 187 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 SMAD9O15198 467 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 ZNF208O43345 1280 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 TPST2O60704 377 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 SS18L1O75177 396 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 FAM107AO95990 144 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 CGAP01215 116 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 TFPIP10646 304 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 CPA2P48052 419 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 KCNJ5P48544 419 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 SLC7A2P52569 658 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 COPZ1P61923 177 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 INTS11Q5TA45 600 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 FCRLAQ7L513 359 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 ARPINQ7Z6K5 226 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 LUZP2Q86TE4 346 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 ATG4DQ86TL0 474 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 BHLHE22Q8NFJ8 381 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 GMPPAQ96IJ6 420 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 ARHGDIGQ99819 225 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 SPOCK3Q9BQ16 436 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 ADAM21Q9UKJ8 722 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 PRDM4Q9UKN5 801 aa16.29■□□□□ 0.2
PDLIM7-216ENST00000506537 TMEM229AB2RXF0 380 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 M0R3H8 397 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 SULT2B1O00204 365 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 SYT5O00445 386 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 LGI1O95970 557 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 FESP07332 822 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 IMPDH2P12268 514 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 COX6B1P14854 86 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 CLK1P49759 484 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 RGS8P57771 180 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 BNIP2Q12982 314 aa16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 SNTB1Q13884 538 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-216ENST00000506537 VEZF1Q14119 521 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms